Gene Sbal223_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3307 
Symbol 
ID7087688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3926382 
End bp3927059 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content52% 
IMG OID643462193 
ProductNucleotidyl transferase 
Protein accessionYP_002359214 
Protein GI217974463 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.276059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TGATCTTGGC CGCCGGACGA GGTGAGAGGT TACGGCCGTT AACGGATAAT 
ATGCCTAAAC CTATGGTGCC AGTATTAGGT AAACCGTTGA TTGTTTATCA TATTGAAAAA
CTTGCCGCGT TAGGCATAGT CGATATCGTC ATTAATCATG CTTGGCTGGG GCATAAATTA
GTCGAGGCGC TGGGCGATGG CAGCGCTTTT GGGGTGCGAA TTCGCTATAG CGCCGAAGAG
AGTGCGCTTG AAACCGGCGG CGGTATTAAA CGGGCTTTGC CTTTATTGTG TGAGGGGGAA
AGCGATGAAC CCTTTTTGGT CATTAATGGT GATGTGTTTA TCGATGCCTT ACCGCCAATC
ACGCAGCTTG CTGCCGATAC GCTCGCCCAT CTCTGGCTAG TGCCTAATCC TGAGCAGCAT
CCGCAGGGGG ATTTCGCCTT GGATGGCAAT CGAGTGCAGG AGCTTGGTGA GACTAAGTAC
ACTTTTTCGG GCATGGGCAT TTATCGGCCG TCGCTTTTTA ATCACACGCC GCAGGGCGCG
TTTGCACTCG GTCCGCTGCT TAGAAAGCAA ATGGCCCAAG GCCGAGTCAG CGGCGCGCTG
TTTCACGGGC TTTGGTGCGA TGTTGGCACG ATTGCACGCC TGCAAGGGCT CGAACTCAGA
TTACAAAGCA ATACCTAA
 
Protein sequence
MKAMILAAGR GERLRPLTDN MPKPMVPVLG KPLIVYHIEK LAALGIVDIV INHAWLGHKL 
VEALGDGSAF GVRIRYSAEE SALETGGGIK RALPLLCEGE SDEPFLVING DVFIDALPPI
TQLAADTLAH LWLVPNPEQH PQGDFALDGN RVQELGETKY TFSGMGIYRP SLFNHTPQGA
FALGPLLRKQ MAQGRVSGAL FHGLWCDVGT IARLQGLELR LQSNT