| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3301 |
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| Symbol | |
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| ID | 7087682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3918200 |
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| End bp | 3919924 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643462187 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002359208 |
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| Protein GI | 217974457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTC AGCCTTCTTG CTTTACCTCT TTCACACAAG CCATTGATGC CTATGCCCTG
CCGCAGCGTT TTACCTTTCC TTTCTATTAC GAACCACATC CGCTGTGCGT GATTGCAGCC
AACGAATTAC AACAACACCT TGAGACTCAA AGTGATTGGC AACATAACTT TGGCCTAACG
GGTGAGTTAA CTGGCGCCAT TGGCAAGATG TTCGGCGTAA TGCTGGTACA AAATGCACAG
GGTGAAGTAG GCTATTTGTC GGCATTTTCG GGCAAGTTGG CCGAGCAAAA CCATTGGCCA
CGCTTTGTTC CACCTGTGTT TGATATGCTG GCTAAGGACA ATTTTTTCCA CGCCGAAAAT
CTGCAAATCA ACCAAATTAA CGAGCAGCTG TTTGCAGTAG AAAACCATCC CGACATTCCG
AGGCTATCAA CCGAGCTAGA AACTGAACAA GCTCAAGCGC AAGCCAAACT TGCCGCCCAC
AGACAAGTGA TGATCGATGG CCGCCAATCC CGCAAGGCGC AGCGCAATCA ACTCGCAGCC
CAATTGGCTG CCAATCCGAC GGATGATACC TTGCGTGAAA ACGCAATAAC TGAAGCCAAG
CTCAGCCAAG AAAGCATCAA TGAAAAGAAT CAGTTAAGAG ATATTAAACG CTATTGGGAT
GAACGTATCC ATACCATCAG CCAAGCGCTA AGCCAACTGA CAGATGAGCG CGAGACGTTA
CGACAACAGC GCAAACGGCT CTCGGCGGCG CTGCAGCAAA AGCTGTTTGA GCAGTATCGG
TTTTTGAATA TTAAAGGCGC AGAAAAGAGC CTTAACGGCA TTTTTAACGG CACGGTTGAG
TTAACGCCGC CCGCAGGTTC AGGTGAATGT GCCGCGCCCA AGTTGTTACA TTACGCCTTT
AAACATGACC TTAAGCCATT AGCAATTGCC GAGTTTTGGT GGGGCGCGCC GCCAAAATCA
GAAATCCGCC AGCATAAGCA GTTTTATCCC GCCTGCCTGC GAAAATGCCA ACCTATTCTA
GGACATATGC TCGAAGGACT CGTGGTCGAT GAAAACCCTC TGCTGACCAA CCCTGCCGAA
GGCAAAACCT TAGCCATCCT CTACCAAGAC GATGCGATGG CGATTGTGAA TAAACCCGCC
GAGTTTTTAT CCGTGCCCGG CAAAGAAATT GAAGACTCAG TGTATTCGCG CATCCGCCAA
GCCTTTCCCC ATGCCACAGG GCCGCTAATC GTCCACAGGC TCGATATGTC GACCTCGGGA
TTAATGGTGA TCGCGCTGAC AAAAGATGCC CATAAACAGC TGCAAAAACA ATTTATCCAG
CGCACTGTGA CTAAACGTTA TGTAGCACTT TTAGCGGGAA TTCCTGCGGT AATGGCGAAT
AAGCAGGCGA CGGGTCACAT CTCTTTACCC TTGCGTGGCG ATTTAGACGA TAGACCGAGA
CAACTCGTTT GCCACGAGTT TGGTAAAGCA GCCGAAACCC ATTGGGAATT GAGCCAACTT
GATGAAATGG CACGTACAGC CCGCGTGTAT CTGTATCCAA AAACAGGCAG AACCCATCAA
CTCAGGGTTC ACTGCGCCCA CTCAGAGGGG CTAAATACCC CGATTGTCGG TGACGACCTC
TACGGCACCC GCGCCAATCG CCTGCATCTG CATGCGGATT TATTGATGCT TCAGCATCCC
GTTACCCGTG AACTGATGCG CTTTCAGGTC GATCCTGATT TTTGA
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| Protein sequence | MQLQPSCFTS FTQAIDAYAL PQRFTFPFYY EPHPLCVIAA NELQQHLETQ SDWQHNFGLT
GELTGAIGKM FGVMLVQNAQ GEVGYLSAFS GKLAEQNHWP RFVPPVFDML AKDNFFHAEN
LQINQINEQL FAVENHPDIP RLSTELETEQ AQAQAKLAAH RQVMIDGRQS RKAQRNQLAA
QLAANPTDDT LRENAITEAK LSQESINEKN QLRDIKRYWD ERIHTISQAL SQLTDERETL
RQQRKRLSAA LQQKLFEQYR FLNIKGAEKS LNGIFNGTVE LTPPAGSGEC AAPKLLHYAF
KHDLKPLAIA EFWWGAPPKS EIRQHKQFYP ACLRKCQPIL GHMLEGLVVD ENPLLTNPAE
GKTLAILYQD DAMAIVNKPA EFLSVPGKEI EDSVYSRIRQ AFPHATGPLI VHRLDMSTSG
LMVIALTKDA HKQLQKQFIQ RTVTKRYVAL LAGIPAVMAN KQATGHISLP LRGDLDDRPR
QLVCHEFGKA AETHWELSQL DEMARTARVY LYPKTGRTHQ LRVHCAHSEG LNTPIVGDDL
YGTRANRLHL HADLLMLQHP VTRELMRFQV DPDF
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