| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3276 |
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| Symbol | |
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| ID | 7087657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3896281 |
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| End bp | 3896988 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643462162 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002359183 |
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| Protein GI | 217974432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.471385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.11353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCTA AGCGCGGCCG ACTCGATCGT TATCTTTGTA CCCAGTTACA CACTCACCGT
AAAGCGGTGC GTGAACTGCT ATTATCGGGC CGAGTGTGCG TCGATGGATT GATAGTGAAG
GACATGGATA GGCAAGTGGA TGAGTTTTCC CACATCCAAC TCGATGAGCA AATACTGCAG
GCCAATGCGC CCGTCTATGT GATGCTTCAC AAGCCGATTG GAGTGGTGAG TGCTACCAAA
GATATTCAGC ATAAAACAGT GATTGATTTG CTTGATTGCG AAGCCCGTGA TGAGTTGCAT
ATTGCTGGCA GACTAGATTT AAACTCTTCG GGTTTGTTGT TATTGACCAA TGACAGCCGC
TGGTCTGATG CGTTGATGTC ACCCACACAC AAGGTCGACA AAGTGTATCG GGTTACCTTA
GCGAATCCGA TAACCGAAGA ATACATCGCT GCATTTGCCG AAGGGATGTA TTTTGGCTTT
GAAGATATTA CAACCCAACC CGCTAAACTG GTTATCCTCG CTGATAACGT GGCTGAAGTG
ACTTTACATG AAGGTAAGTA TCATCAAATC AAACGGATGT TTGGTCGGTT CCGCAATCCG
GTTGTTGGCC TGCATCGATT ATCGATAGGC GATATTGTGC TTGATGAAAA GTTGGCACCG
GGTGAAAGTC GCGCACTGAC TGCCGCTGAA GTGGCCTCTA TCCGTTAA
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| Protein sequence | MQSKRGRLDR YLCTQLHTHR KAVRELLLSG RVCVDGLIVK DMDRQVDEFS HIQLDEQILQ
ANAPVYVMLH KPIGVVSATK DIQHKTVIDL LDCEARDELH IAGRLDLNSS GLLLLTNDSR
WSDALMSPTH KVDKVYRVTL ANPITEEYIA AFAEGMYFGF EDITTQPAKL VILADNVAEV
TLHEGKYHQI KRMFGRFRNP VVGLHRLSIG DIVLDEKLAP GESRALTAAE VASIR
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