Gene Sbal223_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3273 
Symbol 
ID7087654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3891501 
End bp3892262 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID643462159 
Productouter membrane assembly lipoprotein YfiO 
Protein accessionYP_002359180 
Protein GI217974429 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000016984 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.040327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAT TTTCCAAAGG CGTTACCTTA GTCCTATTTT CACTAGCGTT ATCAGCCTGT 
AGCAGCAGCC CTGATGATAA CGATATTGCC GCCAAAACGT CACCTGATGT GCTTTACACT
CAGGCAAGAA CCTCTATGGA ACTTGGCAAT TACTCTAAAG CTGTCCGTTC TTTGGAGGCG
TTAGACTCAC GCTTCCCCTT CGGACCTCAC AAAACTCAAG TCCAGTTAGA CCTGATTTAT
GCTTACTACA AAATGGACGA TGTCGCTTCG GGGATTGCGA ACATAGACAG ATTTATCCGT
CTTAATCCTA CACACCCTGA TATTGACTAT GTGTTCTATA TGCGCGGTTT AGTGAACATG
CAAGCCGACA ACTACTTGTT CCACGATATG CTTAATATCG ACCGAACCGA TCGTGACCCT
AAAAATGCTC AAGATGCTTT CAAAGATTTT GATCGTCTTA TCAAAACTTA CCCTAACAGC
AAATATGCCG CCGATGCGCA AAAACGCATG TTAGCGTTGA AGAATCGCTT AGCAAGATAT
TCAATCCAAG TTGCCGAATA TTATCTTAAG ATGAATGCAT GGAGCGCCGC AGCAATCCGA
GCACAATCTG TAATGGAAAC ATATCCTGGC ACCCCTTCAA ATGAACGGGC ATTAGAGATA
ATGATAGAAG CTTATGGCGA ATTAGGTCAG AGCAAGCTGA AGCAAAACGT GCTCATGGTA
ATGCAAGCTA ACTATCCAAA CAATGAAATC TTATCAAACT AG
 
Protein sequence
MYKFSKGVTL VLFSLALSAC SSSPDDNDIA AKTSPDVLYT QARTSMELGN YSKAVRSLEA 
LDSRFPFGPH KTQVQLDLIY AYYKMDDVAS GIANIDRFIR LNPTHPDIDY VFYMRGLVNM
QADNYLFHDM LNIDRTDRDP KNAQDAFKDF DRLIKTYPNS KYAADAQKRM LALKNRLARY
SIQVAEYYLK MNAWSAAAIR AQSVMETYPG TPSNERALEI MIEAYGELGQ SKLKQNVLMV
MQANYPNNEI LSN