Gene Sbal223_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3248 
Symbol 
ID7087626 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3853636 
End bp3854852 
Gene Length1217 bp 
Protein Length405 aa 
Translation table11 
GC content46% 
IMG OID643462131 
Producthypothetical protein 
Protein accessionYP_002359155 
Protein GI217974404 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.634326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000748002 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTTCAA CAATTAAACG AACTCAACGT GATTATTCCC TCGCTTTTAA ATTGGCCGTT 
GTCGACCAAG TGGAAAAAGG CGAGCTGACT TATAAGCAGG CCCAAGACAA GTACGGTATT
CAAGGTTGTT CCACCGTGTT AGTTTGGCTT CGCAAACATG GAAAACTGGA TTGGTCCCAA
GGAACACCAT CTACATCAAT GCGAGGACAT TTAATGACTG AGCCCACCAC ACTCACTCCC
GAGCAAAAGA TAAAAGCACT CGAAGCCGAA CTTGAAGATA CCCGCATGAA AGCCGCGTTC
TTCGAAGCCA TTGTCGAAAA ACTTAGAACT GACTACGGGA TTTCTGTCGT AAAAAAGCCA
CGAGCGAAAC GCTCCAGGAA AAAACGGCCA TAGGTTATCG CGTCACCCAA TGCTGTCGCT
ACCTCGGGAT TAGCCGTCAG GCGTATTATC AGCAATGTCA GCGGCAAAAA GTATCAGAGC
AGAGGGAGCA ACACGTGTTG CAAACGGTGC AATATGAACG GTTATTTCAA CCACGAATAG
GTACACGCAA GTTGCAGTAT TTACTGAATA AATCACATCA AATAGTGATT GGGCGAGACA
GGTTATTTAG CAGCCTCAGA GCGCATCGTT TGTTGGTCGC ACCTAAACGG GCGTACCACA
AAACGACTCA CAGTCATCAT CGATTTAGGT GTCATCCCAA CTTGCTTAAG CCCAGTGAGC
AACAAGTGGA CATCACTCGC TCAGAGCAAG TTTGGGTGGC TGATATTACC TATCTGCCAC
TGCAAAATAA TGAAGCCTAC TTAAGCCTGG TGACCGATGC CTGGTCACGA AAAATCGTGG
GCTATCATGT TGATGATAAT CTCAAAACAG ATGGTGTGCT AACAGCGTAC AAACAGGCAC
TGAGGCAGCG GCAAGACAAA GATAAACCGC TGATACACCA CTCAGATCGA GGAATACAAT
ACTGCTCAAA CGCTTATCAA GCGGTTCACA CACATCATGG TGTGACATGC TCAATGACAG
ACGGATATGA CTGCTATCAA AATGCATTAG CAGAACGCGT AAATGGCATA TTGAAGCAGG
AGTTTTTAAC ACATAAGCCA GCAACGCTGC AGGAGGCGCG ACAGATGGTG GCAGAAGCGG
TCGCCATATA TAATCAACGA CGGCCACATT TGGCCTTAAA ATATAAAACG CCCGATGAGG
TTCATCAGGC GTTTTAG
 
Protein sequence
MTSTIKRTQR DYSLAFKLAV VDQVEKGELT YKQAQDKYGI QGCSTVLVWL RKHGKLDWSQ 
GTPSTSMRGH LMTEPTTLTP EQKIKALEAE LEDTRMKAAF FEAIVEKLRT DYGISVVKKA
TSETLQEKTA IGYRVTQCCR YLGISRQAYY QQCQRQKVSE QREQHVLQTV QYERLFQPRI
GTRKLQYLLN KSHQIVIGRD RLFSSLRAHR LLVAPKRAYH KTTHSHHRFR CHPNLLKPSE
QQVDITRSEQ VWVADITYLP LQNNEAYLSL VTDAWSRKIV GYHVDDNLKT DGVLTAYKQA
LRQRQDKDKP LIHHSDRGIQ YCSNAYQAVH THHGVTCSMT DGYDCYQNAL AERVNGILKQ
EFLTHKPATL QEARQMVAEA VAIYNQRRPH LALKYKTPDE VHQAF