Gene Sbal223_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3245 
Symbol 
ID7087623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3850548 
End bp3851504 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID643462128 
Producttransaldolase B 
Protein accessionYP_002359152 
Protein GI217974401 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000112094 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000667795 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCAATA CATTAGAGCA ACTCAAGTTA TATACCACTA TCGTCGCTGA CACAGGCGAC 
ATCGAAGCGA TTAAACGCTA CCAACCTGAA GATGCGACAA CCAATCCATC GCTCATCTTG
AAAGCGGCTC AAATTCCTGA ATACGAATCC CTCATTGATA ACGCTATCGA CTGGGCAAAA
TCACAAAGTG ACGATCTCGC GCAGCAACTT GATGATGCCA GCGACAAGCT CGCCGTTAAT
ATCGGTGTAG AAATACTGAA ACTCGTTCCT GGTCGTATCT CTACTGAAGT CGATGCCCGT
TTATCATTCG ATAAAGAACA ATCAATCGCT AAGGCCCATA AGCTGGTTCG CCTCTACAAA
GAAGCGGGCG TTGATAAATC ACGCATTCTG ATCAAACTCG CTTCAACTTG GGAAGGCATT
TGTGCCGCTA AAGAGCTGGA GAAAGAAGGC ATCAACTGTA ACTTAACCCT ACTATTTAGC
TTTGCCCAAG CACGTGCTTG TGCCGAAGCG GGTGCTTATC TGATTTCGCC TTTTGTTGGC
CGCATTCTTG ATTGGTACAA AAAAGATACG GGTAAAGACT ACGACGCAGT AAATGATCCA
GGTGTCGTTT CTGTTACCGA AATCTATAAT TATTACAAAC AGCATGGTTT CAATACTGTC
GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AGCTAGCAGG TTGTGATCGT
CTCACGATTG GTCCTTCTCT GTTAGAAGAA CTGGCTAATT CACAAATAGA CATTACCCCT
AAACTGGTTG CAGCAACCAG CACTGTTGCT GCCGAAGCCC CATTGACAGA AGCGCAATTC
CGTTGGGACT TTAACCAAGA TCCAATGGCT GTAGATAAGC TTGCGGAAGG TATTCGAAAC
TTTGCAATAG ACCAAGGCAA ACTCGAAGTG ATGCTCACGG CTAAGCTCGC AAACTAA
 
Protein sequence
MANTLEQLKL YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYES LIDNAIDWAK 
SQSDDLAQQL DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEQSIA KAHKLVRLYK
EAGVDKSRIL IKLASTWEGI CAAKELEKEG INCNLTLLFS FAQARACAEA GAYLISPFVG
RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGFNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQIDITP KLVAATSTVA AEAPLTEAQF RWDFNQDPMA VDKLAEGIRN
FAIDQGKLEV MLTAKLAN