| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3238 |
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| Symbol | rpsT |
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| ID | 7085851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3841560 |
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| End bp | 3841826 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643462121 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_002359145 |
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| Protein GI | 217974394 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000254037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.534831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAT
AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTAATCGC TGCAATTAAA
GCAGGCGATC ACAAAACAGC AGCAGAAGCT TTTGCTGTTG CACAACCAAT CGTTGACCGT
ATGGCGACTA AAGGTCTTAT TCACAAGAAT AAAGCCGCTC GTCAAAAGGC ACGTTTGAAC
GCTAAGATCA AAGCAATCGC TGCTTAA
|
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| Protein sequence | MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTAAEA FAVAQPIVDR
MATKGLIHKN KAARQKARLN AKIKAIAA
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