Gene Sbal223_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3235 
SymbolileS 
ID7085848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3835892 
End bp3838714 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content47% 
IMG OID643462118 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002359142 
Protein GI217974391 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.489815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ATAAATTTAC TTTGAATTTG CCGGAAACAG AGTTTCCGAT GCGTGGTAAT 
TTGGCAAATC GCGAGCCAGA GATGTTAGAG CGCTGGACAA AAGACGGTTT GTATCAGCAG
ATCCGTGATA GCCGAATTGG CCGTACTCCC TTCATTTTGC ATGACGGCCC ACCGTATGCG
AATGGCAGTA TTCATATTGG TCACTCAGTT AATAAAATCC TCAAGGACAT TATTATTAAG
TCAAAAACCA TGTCTGGTTT TGACGCACCG TATGTGCCAG GTTGGGATTG CCACGGTTTA
CCTATCGAGC TGAAAGTTGA GCAAAAAGTG GGTAAGCCAG GTCAAAAAAT CTCTGCGGCA
GAATTCCGCG AAGAATGCCG TAAATACGCC GCCGAGCAAG TTAATGGTCA ACGTGAAGAT
TTTATCCGTT TAGGCGTATT AGGCGACTGG CAAAATCCAT ACCTGACAAT GGATTTTTCA
ACCGAAGCTA ATATTGTGCG TTCTTTATCG AAAGTGATTG AGAGTGGTCA CTTGCATAAA
GGCGTTAAGC CAGTGCATTG GTGTACTGAT TGCGGTTCTG CTTTAGCTGA AGCTGAAGTG
GAATACGAAG ACAAAACATC ACCTGCTATC GATGTGGCGT TTGTGGCCGC CGATAGTAAA
GCCGTTGCGG CTAAGTTTGG GGTAAGCGAT TACTCACATC CTGTTTCTAT GGTGATTTGG
ACTACCACGC CATGGACTCT GCCTGCGAAC CGCGCCTTGT CTTTGAGTCC TGAGCTGGAT
TACAGCTTAG TTGAATTCGA AAAAGACGGC GTTACGCAAG CGCTTATTTT AGCTGAAGTA
TTAGTTGAAT CTTGCCTGAC TCGCTATAAC GTGGAAAGCC ATACAGTGCT TGGCTCTGCC
AAAGGCGCAG CGTTTGAGCT TGTCCGCTTT AATCACCCAT TCTTAGATTT TGATGTTCCG
GCAATTTTAG GCGATCACGT TACGACGGAT GCGGGTACTG GTATCGTTCA CACTGCCCCA
GGTCACGGTC AAGACGACTT TGTGGTTGGG CAAAAATATG GTTTAGAAGT GGCAAATCCT
GTTGGCGACA ACGGTGTATA CAAGCCTGAT ACTGAGTATT TTGCTGGACA ACATGTCTTT
AAAGCCAACG ATAACGTGGT TGCATTACTG AGAGAAAAGA GCGCCTTGCT GAATCACGTG
GCTTACCGTC ATAGCTATCC ACATTGCTGG CGCCACAAAA CACCGATCAT CTTCCGTGCG
ACGCCGCAGT GGTTTATCTC TATGGATAAC CATGGCCTGC GTACGCAAGC ATTGAAAGAA
ATCGAACAGA CTCAATGGAT CCCTGATTGG GGCCAAAGTC GTATCGAAAA AATGGTTGAA
AACCGCCCTG ACTGGTGTAT CTCACGCCAA CGTACTTGGG GTGTGCCTAT CACGCTGTTT
GTGAATCGTG AAACTGAAGA GTTGCACCCA GATAGCGTCT CGCTAATGGA ACGTGTAGCC
AGTCGTATTG AACAGCAAGG CATTCAAGCT TGGTGGGATC TCGATGCCGC CGAATTATTG
GGTGACGAAG CTGAGCAATA CCGCAAAGTA ACCGACACCT TAGACGTTTG GTTTGACTCA
GGTTCAACCT TCTCGTCAGT GGTGGCGGCT CGTCCTGAAT TCCACGGACA CGGCGTTGAC
TTGTATCTTG AAGGTAGCGA CCAACATCGC GGCTGGTTTA TGTCATCTTT GATGATTTCA
ACCGCTATGA ATGGCAAAGC ACCTTATAAG CAAGTACTAA CTCACGGTTT TACCGTCGAT
GGTAAAGGCC GCAAGATGTC AAAATCTATC GGTAACGTGA TTGCGCCGCA AACGGTAACC
AACAAATTAG GCGCCGATAT TCTGCGTTTA TGGGTTGCGG CAACAGATTA CAGCGGTGAG
ATGACGGTTT CTGACGAAAT CTTAAATCGT AGTGCCGATG CCTATCGTCG TATTCGTAAC
ACTGCCCGTT TCCTATTAGC CAACTTAAAC GGTTTCGAGC CTGCTAAGGA TTTAGTTGCT
GTTGAAGATA TGGTGGCGTT AGACCGTTGG GTTGTGCGCC GCGCTGCTGC ATTGCAACAG
GAAATTATTG AAGCCTATGA GCAATATAAC TTCCATATTG TGACTCAAAA ACTGATGCAG
TTCTGCTCGG TTGAGTTAGG CAGTTTCTAT CTGGACATCA TCAAAGATCG CCAATACACG
GCTAAGCAAG AAGGTCATGC GCGTCGCAGC TGTCAATCGG CGCTGTATTT GATCTCTGAG
GCCATGGTGC GTTGGATTGC GCCAATTCTA AGCTTCACAG CGGACGAAGT GTGGCAACTA
TTGCCTGGCG AGCGTGATGC CTATGTCTTT ACTCAAGAAT GGTATCAAGG CTTGAAATCA
GTCACCTTAG CGACGGATTT GAGCGACGAC TATTGGCAGC AACTGCTGAC TGTGCGTAAC
GAAGTCAATA AAGTGATTGA ACAAGCTCGC CGTGATAAAC GTATTGGTGG TTCATTAGAA
GCGGAAGTGA CCTTGTTTGC TGATGCAGCG TTGACTGAAC AATTAACCCA TATCGGCGAT
GAGCTAAGAT TTGTGTTATT GACCTCTGAA GCCAAAGTCT TGCCTTTAGC GGATGCGACA
TCGGAAGCGG TTGAAACTGA GCTGGCGTCA CTGAAATTAC TGGTTGCTTC AAGCACTGCT
GAGAAGTGTG AGCGTTGTTG GCATCACAGA GAAGAGGTTG GCACCATCGA GGCCCACCCA
ACACTCTGTA CTCGCTGCGT AACAAACATT GAAGGTGACG GCGAAGTTCG TCTGTTTGCG
TAA
 
Protein sequence
MSDYKFTLNL PETEFPMRGN LANREPEMLE RWTKDGLYQQ IRDSRIGRTP FILHDGPPYA 
NGSIHIGHSV NKILKDIIIK SKTMSGFDAP YVPGWDCHGL PIELKVEQKV GKPGQKISAA
EFREECRKYA AEQVNGQRED FIRLGVLGDW QNPYLTMDFS TEANIVRSLS KVIESGHLHK
GVKPVHWCTD CGSALAEAEV EYEDKTSPAI DVAFVAADSK AVAAKFGVSD YSHPVSMVIW
TTTPWTLPAN RALSLSPELD YSLVEFEKDG VTQALILAEV LVESCLTRYN VESHTVLGSA
KGAAFELVRF NHPFLDFDVP AILGDHVTTD AGTGIVHTAP GHGQDDFVVG QKYGLEVANP
VGDNGVYKPD TEYFAGQHVF KANDNVVALL REKSALLNHV AYRHSYPHCW RHKTPIIFRA
TPQWFISMDN HGLRTQALKE IEQTQWIPDW GQSRIEKMVE NRPDWCISRQ RTWGVPITLF
VNRETEELHP DSVSLMERVA SRIEQQGIQA WWDLDAAELL GDEAEQYRKV TDTLDVWFDS
GSTFSSVVAA RPEFHGHGVD LYLEGSDQHR GWFMSSLMIS TAMNGKAPYK QVLTHGFTVD
GKGRKMSKSI GNVIAPQTVT NKLGADILRL WVAATDYSGE MTVSDEILNR SADAYRRIRN
TARFLLANLN GFEPAKDLVA VEDMVALDRW VVRRAAALQQ EIIEAYEQYN FHIVTQKLMQ
FCSVELGSFY LDIIKDRQYT AKQEGHARRS CQSALYLISE AMVRWIAPIL SFTADEVWQL
LPGERDAYVF TQEWYQGLKS VTLATDLSDD YWQQLLTVRN EVNKVIEQAR RDKRIGGSLE
AEVTLFADAA LTEQLTHIGD ELRFVLLTSE AKVLPLADAT SEAVETELAS LKLLVASSTA
EKCERCWHHR EEVGTIEAHP TLCTRCVTNI EGDGEVRLFA