Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3172 |
Symbol | |
ID | 7085785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3754386 |
End bp | 3757046 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643462056 |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_002359080 |
Protein GI | 217974329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00636451 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTA TCGCATTGAG ACCCAAAACC TTTAGTTTGA GTTTATTGGC TGTGCTGACC TGCGCCAGTT TAAGCGGATG CAGCAAAACA GAGCAGATAA AAGCAGCTGA CAGTCAGTCT GTTAAGCCTA GTGATGTGGC CGCATCTAGC TCACCTAATA GCCCCAATGG TTACAGTATC AATGGTAAGT CTACAGATAT TAATATTTGG CCGCAGTTAA CTATCCCCCA TAAAAATCAC GAAGATGTTG AAAAACGCGT CGCAGATTTA TTGGCAAAAA TGACGCTAGA GCAGAAAGTT GCGCAGATGA TCCAACCAGA GATCCGCGAT ATCACGGTCG AAGATATGCG CAAATACGGT TTTGGCTCTT ATTTGAATGG TGGCGGTTCT TACCCGAACC AAGATAAACA TGCGACGCCA GCAGATTGGA TTGCCTTAGC CGACGCTATG TATCAAGCCT CTATGGATGA CTCGCTCGAT GGCATCAGTA TTCCAACCAT GTGGGGCACG GATGCGGTTC ATGGTCACAA CAATGTGATT GGCGCAACAC TGTTCCCGCA TAATATAGGG TTAGGTGCGG CCCATCATCC TGAGCTTATT CAGCAAATTG CTGCGATCAC CGCCAAAGAA GTCATGGTGA CGGGGATTGA TTGGGTATTT GCACCGACTG TCGCTGTGGT GCGTGATGAC CGCTGGGGAC GAACCTACGA GGGGTATTCA GAAGATCCTG TCATCGTTAA ATCCTATTCG CACGCGATTG TTGAGGGATT ACAAGGGGGC AATGATAAAG ACTTCTTATC AGATCAGCAT GTTATCGCTA CTGTAAAACA TTTCTTAGGG GATGGTGGTA CCGAAGGCGG GGATGATCAG GGCGATAATA TCGCATCCGA ACAAGCCTTA TTTGATATTC ATGCCCAAGG TTATGTCGGC GGGTTAACTG CAGGCGCACA AACGGTAATG GCCTCATTCA ATAGCTGGCA CGGCGCTAAA AATCACGGTA ATCCTTATTT ATTGACCGAT GTACTTAAGG CTCGCATGGG CTTTGATGGC TTTGTCGTTG GCGATTGGAA TGGTCATGGG CAGGTTGAAG GTTGCAGTAA CGAATCCTGT CCTCTGGCCG TTAATGCGGG CTTAGACGTA TTTATGGTGC CTACGGCCGC ATGGAAACCC TTATATGAAA ACACTATCGC GCAAGTTAAG TCGGGTTTGA TCAGCCAAGC GCGGATTGAT GATGCAGTGA GTCGTATCCT GCGCGTAAAA ATTCGGGCGG GATTATTTGA AAAGCCAAGT CCTGCTAAGC GTCCTTTATC GGGTAAAACC GAGTTGATTG GCCAAGCTAG CCACAGGGAT GTTGCGCGCC AAGCGGTGCG TGAATCATTG GTATTATTGA AAAATAATCA GCATTTACTG CCGCTATCGC CCAAAGCTAA GGTACTCGTC GCGGGTGATG CCGCCGATAA TATTGGCAAG CAATCGGGTG GTTGGTCTAT TACTTGGCAG GGTACAGATA ACCAAAATGC AGATTTCCCT GGAGCGACAT CGATATATGC CGGTATAGCA AAGGCGGTTT CTGCCAGCGG TGGTAGCGCT GTGCTGAGTG TTGATGGTCA ATTTGATGCT GCGAATAAAC CCGATGTGGC GATTGTCGTA TTTGGTGAAG AGCCCTATGC CGAAGGGAAT GGAGATATCG ATAATCTTGA ATATCAAAGG GGAAACAAGC GTGACTTAGC TTTATTACAA AAGCTCAAAG CCGCTGGGAT TCCTGTGGTC TCTGTGTTTA TTAGCGGTCG ACCTTTGTGG GTCAATCCTG AGCTCAATGC CTCTGACGCT TTTGTCGCCG CTTGGTTGCC TGGCACTGAA GGAGCAGGGA TTAGTGAAGT GTTATTCACT CAAGCTAATG GTGATGTTCA GTATGACTTT AATGGCAAAT TATCTTTCTC ATGGCCGTCG ACACCGCAGC AAACTCAAGT GAATGTTCAC GACAGTGATT ATTCGCCATT ACTTCCCTAT GGCTATGGCC TGAGCTATGC GGATAAGGCA AATAGTACTG CGCCTGCGAT ATTATCGAAT AGTTTGTCTG AAGATAATTT CAGTGAACAA GTGCAACTCA GCCAGAAGCC GTTATTCGAG CGTGCCGTTA AGGCGCCTTG GAAAATGCTG ATTGGCAGTG TTGAAGGTGA CAAGGTTTCG ATGGAACCTA TCGCCAGCAG CGTGCAGTCG AATGATGTTG TTACGATTAA AACCTTTGAT AAACAAGTAC AAGAAGATGC ACGCCATGTC AGCTTTAACG GTAAGGCGCT TGGTTTTGTG AGTTTGCAGG GGAACTTCCC TGAAGACTTA CGGGCTTATC TGGCGAGCAA GTCAGTGTTG AGTATGCAGG TTAAAGTCGG TTCATCGATT AAAGCGCCTG TTAATGTCGG CATGACCTGC GAAGGCGATT GTCGAGCCAA TGTGGATATC AGCACTCAGC TAAGCGCGTT AAGCCTTGAT ACTTGGAGTG AACTAAACAT AGATCTCACT TGCTATCAGG GGCAGGGGAT TGATTTTGGT AAAATTATCT CGCCTTTCAC ATTGTCATCA TCGGGCGCTG TGGATATCAG TTTTAGCGAT ATTATCTTAA AGCCAAAGAC GGCCAGTATG GCGTCAGTCG AGTGTCTGTA A
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Protein sequence | MSVIALRPKT FSLSLLAVLT CASLSGCSKT EQIKAADSQS VKPSDVAASS SPNSPNGYSI NGKSTDINIW PQLTIPHKNH EDVEKRVADL LAKMTLEQKV AQMIQPEIRD ITVEDMRKYG FGSYLNGGGS YPNQDKHATP ADWIALADAM YQASMDDSLD GISIPTMWGT DAVHGHNNVI GATLFPHNIG LGAAHHPELI QQIAAITAKE VMVTGIDWVF APTVAVVRDD RWGRTYEGYS EDPVIVKSYS HAIVEGLQGG NDKDFLSDQH VIATVKHFLG DGGTEGGDDQ GDNIASEQAL FDIHAQGYVG GLTAGAQTVM ASFNSWHGAK NHGNPYLLTD VLKARMGFDG FVVGDWNGHG QVEGCSNESC PLAVNAGLDV FMVPTAAWKP LYENTIAQVK SGLISQARID DAVSRILRVK IRAGLFEKPS PAKRPLSGKT ELIGQASHRD VARQAVRESL VLLKNNQHLL PLSPKAKVLV AGDAADNIGK QSGGWSITWQ GTDNQNADFP GATSIYAGIA KAVSASGGSA VLSVDGQFDA ANKPDVAIVV FGEEPYAEGN GDIDNLEYQR GNKRDLALLQ KLKAAGIPVV SVFISGRPLW VNPELNASDA FVAAWLPGTE GAGISEVLFT QANGDVQYDF NGKLSFSWPS TPQQTQVNVH DSDYSPLLPY GYGLSYADKA NSTAPAILSN SLSEDNFSEQ VQLSQKPLFE RAVKAPWKML IGSVEGDKVS MEPIASSVQS NDVVTIKTFD KQVQEDARHV SFNGKALGFV SLQGNFPEDL RAYLASKSVL SMQVKVGSSI KAPVNVGMTC EGDCRANVDI STQLSALSLD TWSELNIDLT CYQGQGIDFG KIISPFTLSS SGAVDISFSD IILKPKTASM ASVECL
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