Gene Sbal223_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3166 
SymbolrpsU 
ID7085779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3745915 
End bp3746130 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content45% 
IMG OID643462050 
Product30S ribosomal protein S21 
Protein accessionYP_002359074 
Protein GI217974323 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0828] Ribosomal protein S21 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000179646 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.223095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTA TTAAAGTACG TGAAAACGAA CCATTCGACG TAGCTCTGCG TCGTTTCAAG 
CGCTCTTGTG AAAAAGCTGG TATTTTAGCC GACGTGCGTG CTCGTGAATT CTACGAGAAG
CCAACTACTG CACGTAAGCG CGCAAAAGCA GCTGCAGTTA AACGTTTAGC TAAGAAGCTT
TCTCGCGAAA ACGCACGTCG CGTACGTTTA TATTAA
 
Protein sequence
MPIIKVRENE PFDVALRRFK RSCEKAGILA DVRAREFYEK PTTARKRAKA AAVKRLAKKL 
SRENARRVRL Y