| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3165 |
|---|
| Symbol | |
|---|
| ID | 7085778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3744683 |
|---|
| End bp | 3745699 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643462049 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_002359073 |
|---|
| Protein GI | 217974322 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000255417 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.184542 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTTC TAGGTATTGA AACATCTTGT GACGAGACAG GTATCGCCGT CTATGACGAT
GAACTGGGCT TATTATCGCA CACTTTATAC AGTCAAGTTA AGCTGCATGC TGACTATGGT
GGTGTGGTGC CTGAGTTGGC GTCGCGTGAC CATGTACGCA AAATTGTGCC GCTTATTCGT
CAAGCGCTGA AAGATGCGAA TACTGAAATG GCTGATCTCG ACGGGATTGC CTACACCAAG
GGCCCAGGTT TGATTGGTGC TTTGCTTGTT GGTGCCTGTG TGGGGCGTTC ACTGGCTTTT
GCTTGGGACA AGCCTGCAAT CGGTGTGCAC CATATGGAAG GGCACCTGCT GGCGCCTATG
CTCGAAGATG ACGCGCCTGA GTTCCCCTTT GTGGCCTTAT TAGTTTCCGG TGGCCATTCA
ATGTTGGTTA AAGTTGATGG GATTGGCCGT TATGAAGTAT TAGGTGAGTC GGTTGACGAT
GCCGCGGGTG AAGCATTCGA TAAAACGGCC AAGTTGATGG GGCTGGATTA TCCCGGCGGT
CCGCGCTTAG CGAAACTGGC AGCTAAAGGC TTACCCGCAG GCTATAAGTT CCCGCGTCCT
ATGACCGATA GACCAGGACT CGACTTTAGT TTTTCGGGTT TAAAAACCTT TACCGCCAAT
ACCATTGCCG CTGAACCTGA TGATGAGCAA ACGCGCGCCA ATATTGCCCG TGCCTTTGAA
GAAGCCGTGG TTGATACGCT GGCGATTAAA TGTCGTCGTG CGCTGAAGCA AACTGGCTAT
AACCGCTTAG TGATTGCCGG TGGCGTGAGT GCGAATACGC GCTTAAGGGA AACCTTGGCC
GAAATGATGA ACTCGCTAGG TGGACAAGTG TTTTATCCCC GCGGTGAGTT TTGTACCGAT
AACGGCGCCA TGATTGCCTT TGCGGGATTG CAGCGTTTAA AGGCGGGACA ACACGAAGAT
TTAGCGGTAA AAGGTCAACC TCGATGGCCA TTAGATACCT TGCCACCTGT GGCATAA
|
|---|
| Protein sequence | MRVLGIETSC DETGIAVYDD ELGLLSHTLY SQVKLHADYG GVVPELASRD HVRKIVPLIR
QALKDANTEM ADLDGIAYTK GPGLIGALLV GACVGRSLAF AWDKPAIGVH HMEGHLLAPM
LEDDAPEFPF VALLVSGGHS MLVKVDGIGR YEVLGESVDD AAGEAFDKTA KLMGLDYPGG
PRLAKLAAKG LPAGYKFPRP MTDRPGLDFS FSGLKTFTAN TIAAEPDDEQ TRANIARAFE
EAVVDTLAIK CRRALKQTGY NRLVIAGGVS ANTRLRETLA EMMNSLGGQV FYPRGEFCTD
NGAMIAFAGL QRLKAGQHED LAVKGQPRWP LDTLPPVA
|
|---|
| |