Gene Sbal223_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3153 
Symbol 
ID7087931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3732153 
End bp3733445 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content49% 
IMG OID643462037 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_002359061 
Protein GI217974310 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT CCGAAGCGCT ATTTGAACAG GCTAAAAAAA CCATCCCCGG CGGCGTTAAC 
TCTCCGGTTC GTGCATTTAA TGGTGTAGGC GGTTCGCCAC TGTTTATTGA AAAAGCAAAC
GGCGCTTATA TTTACGATGC CGATGGCAAA GCTTATATCG ACTATGTCGG TTCTTGGGGC
CCGATGATCC TCGGCCACAA CCACCCTAAA ATCCGTGCTG CAGTATTAGC GGCGGTGGAA
AATGGCTTGT CTTTTGGCGC ACCAACTGAG CTTGAAGTGC AAATGGCCGA GAAAGTCATC
TCTATGGTGC CTTCTATCGA GCAAGTGCGT ATGGTGAGTT CAGGTACGGA AGCCACTATG
AGCGCCATTC GTTTAGCACG AGGTTTTACT AATCGTGACA AGATCTTAAA ATTCGAAGGT
TGTTACCACG GCCATGCGGA TTGTCTATTA GTTAAAGCAG GTTCTGGCGC TCTAACTTTA
GGCCAACCTA GCTCACCCGG TATTCCTGAA GACTTCGCCA AGCACACCTT AACGGCAGTG
TATAACGACT TAGATTCTGT AAGAACTTTG TTCGAGCAGT ATCCAACTGA CATTTCTTGC
ATCATCATCG AGCCCGTTGC TGGCAACATG AACTGCATTC CACCTATCCC AGGTTTCCTT
CAAGGTCTGC GTGATATTTG TGACGAGTTC GGTGCCTTAA TGATCATCGA CGAAGTGATG
ACAGGGTTCC GCGTATCACA AAGCGGCGCT CAAGGTTACT ACGGCGTAAC ACCTGACTTG
ACCACACTCG GTAAAGTGAT TGGTGGCGGT ATGCCAGTAG GGGCCTTCGG TGGCCGTAAA
GATGTGATGC AGTTTATCGC GCCTACGGGT CCGGTTTACC AAGCGGGAAC GTTATCTGGT
AACCCAATTG CGATGTCAGC AGGTTTGGCG CAAATGGAAG CCCTGTGTGA AGAAGGTCTA
TACGAAGAGT TGAGCGCGAA AACCAAACGT ATTGCAGAAG GTTTTAAAGC GGCAGCTGAC
AAGCACGGTA TTCCAATGGC GATCAACTAT GTTGGCGGCA TGTTCGGTTT CTTCTTCACA
GAACAACCGG AAATCACCCG TTTTGACCAA GTGACCCAAT GTAATATTGA GCAGTTCCGT
ATTTTCTACC ACGGCATGTT AGATGAAGGC GTGTACTTGG CACCTAGCGC TTATGAAGCC
GGTTTCCTGT CTATGGCCCA TGGCGAAGAA GAAATGCGCT TGACCTTAGA AGCGGCTGAC
CGCGTATTAG CGAGCATGAA AGCGGCAAGC TAA
 
Protein sequence
MTRSEALFEQ AKKTIPGGVN SPVRAFNGVG GSPLFIEKAN GAYIYDADGK AYIDYVGSWG 
PMILGHNHPK IRAAVLAAVE NGLSFGAPTE LEVQMAEKVI SMVPSIEQVR MVSSGTEATM
SAIRLARGFT NRDKILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAV
YNDLDSVRTL FEQYPTDISC IIIEPVAGNM NCIPPIPGFL QGLRDICDEF GALMIIDEVM
TGFRVSQSGA QGYYGVTPDL TTLGKVIGGG MPVGAFGGRK DVMQFIAPTG PVYQAGTLSG
NPIAMSAGLA QMEALCEEGL YEELSAKTKR IAEGFKAAAD KHGIPMAINY VGGMFGFFFT
EQPEITRFDQ VTQCNIEQFR IFYHGMLDEG VYLAPSAYEA GFLSMAHGEE EMRLTLEAAD
RVLASMKAAS