| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3124 |
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| Symbol | nhaA |
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| ID | 7087902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3699231 |
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| End bp | 3700400 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643462008 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_002359032 |
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| Protein GI | 217974281 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.646901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.440513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAG CAATTAGAAA TTTTCTGAGC CAAGAATCGG CTGGCGGTAT CCTATTATTG
GTTGCTGTTG CCTTAGCTAT GCTGATGGCC AATTCCCCTT TATCTGGACT TTATCAAGGC
TTTTTAGGCA CTGACGTACA AGTTAAAATT GGCGAGCTCG ATATTCATAA GCCGCTAATT
CTGTGGATCA ACGATGGCCT GATGGCCGTA TTCTTTTTGC TTATTGGTTT AGAAGTTAAA
CGTGAGTTAC TCGAAGGCGC CTTATCGAGT GTCGCTCAAG CCTCTCTGCC TACCTTTGCG
GCCATTGGCG GCATGTTAGT CCCTGCTGGG GTGTACTTGC TGTTTAACTA TGGCGATCCG
GTCACACAAG CGGGCTGGGC GATTCCTGCC GCGACGGATA TTGCGTTTGC TTTAGGTATT
ATGGCGCTGC TTGGGAGCCG CGTTCCCGTT TCACTGAAAG TCTTCTTACT TGCTTTAGCG
ATTATCGATG ACTTAGGCGT CATAGTGATT ATCGCGCTGT TCTACAGCAC CGACCTATCA
ACCATCAGTT TAGTGATTGC CAGTTTAGCG ATTGCGGGTT TGGTTGGATT AAACCGCAAA
GGGGTCACCT CACTTTTACC CTATGGCATC TTAGGATTAA TCCTTTGGGT CGCCGTACTT
AAGTCTGGAG TGCATGCGAC TCTGGCTGGC GTCATCATCG CTTTCTGCAT TCCATTACGG
GCAAAGGATG GCAGCTCACC TTCAGAAGGC TTAGAGCACA GTTTGCACCC TTGGAGCACC
TTCTTCATTC TGCCTGTGTT CGCTTTCGCC AATGCGGGTG TTTATGTCGG CAATATGAAT
TTGGAGACGT TAATTTCTCC GGTACCTGTC GGTATTGCAC TGGGCCTGAT GTTAGGCAAG
CCCATTGGTG TGATGGTGTT TAGCTATATT GCGGTGAAAC TTAAATTGGC TCAGTTACCC
GATGGCGTAG GTTGGAAGCA AATTGCCCCA GTCGCGGCCA TGTGCGGTAT TGGTTTTACT
ATGTCTATGT TTATTGCGTC GTTAGCCTTT GAACATGCAG ACCCTATGTA CGGTGACTTA
GCACGCCTAG GAACCTTAAT CGGTTCGATT ATGGCGGCAT TAGTCGGGTA TTTCTGGTTA
TCAAAAGTGT TACCTAATAA AGGAGTATAA
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| Protein sequence | MEKAIRNFLS QESAGGILLL VAVALAMLMA NSPLSGLYQG FLGTDVQVKI GELDIHKPLI
LWINDGLMAV FFLLIGLEVK RELLEGALSS VAQASLPTFA AIGGMLVPAG VYLLFNYGDP
VTQAGWAIPA ATDIAFALGI MALLGSRVPV SLKVFLLALA IIDDLGVIVI IALFYSTDLS
TISLVIASLA IAGLVGLNRK GVTSLLPYGI LGLILWVAVL KSGVHATLAG VIIAFCIPLR
AKDGSSPSEG LEHSLHPWST FFILPVFAFA NAGVYVGNMN LETLISPVPV GIALGLMLGK
PIGVMVFSYI AVKLKLAQLP DGVGWKQIAP VAAMCGIGFT MSMFIASLAF EHADPMYGDL
ARLGTLIGSI MAALVGYFWL SKVLPNKGV
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