Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3122 |
Symbol | nhaR |
ID | 7087900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3697861 |
End bp | 3698769 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643462006 |
Product | transcriptional activator NhaR |
Protein accession | YP_002359030 |
Protein GI | 217974279 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.896078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.207163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCACT TGAATTACAA CCACCTGTAT TATTTTTGGA TGATTAAGAA AAAGGGCTCG GTTGCTAAGG CGGCTGAAGC CCTCTGTTTA ACGCCGCAAA CGATAACAGG GCAAATTCGT GCCCTAGAAG ACAGGTTGAA TGGCAGTTTA TTCAAGCGAG TAGGGCGGAC ACTGGTAGCC ACTGAGTTAG GTGAGTTAGT ATTTCGCTAC GCCGATAAGA TGTTTAGTCT TAGCTATGAA ATGCTCGATT TACTTAACTA TCAAAAAGAT GATGCCATGC TTTTTGAAGT GGGCATTGCT GATGCCTTGT CTAAAGCCTT AGTTAGCCGT GTCTTGTTAT CCGTCGTCCC CAATGACAGT TCTATGCATT TAGCTTGTTA TGAGGCGACC CACGAAAGCC TGATGGCGCG TTTGCGTGAG CATAAACTGG ATATGATCCT CTCCGATTGC GCCGGTGAAT CACTGAAGTA TCCCGAAATC TTATCTAAAA AGTTGGGCGA GTGTGGTGTG AGTTTTTTCT CCGCTGATAC TTATAGTGCT GATTTCCCCG CCTGTTTAGA GCAAGGCCAG CTATTAATTC CCGGCCGCAG AACCTCACTT GGACAGCAGT TATATCGCTG GTTTGACGAA CAAAATCTTA AAGTCAGTAT CTTGGGTGAG TTCGACGATG CGGCCATGAT GAAGGCCTTT GGTTACCTTA AACGGGGGAT ATTTGTCACG CCGTCGATTT ATCGCCAAGA AGTGATTTCC CATGGGATGA ATTTGCTCGG TGAAACCACG GATGTGAAAG AGGAATACCA TGTGATGTTT GCCGAACGTA TGATCCAACA TCCTGCGGTA AAGCGCTTAT TGGACACAGA TTTCAGCGAT CTCTTTGCGG GACGCGATAT GCAAGTAAAA CAATGCTAA
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Protein sequence | MLHLNYNHLY YFWMIKKKGS VAKAAEALCL TPQTITGQIR ALEDRLNGSL FKRVGRTLVA TELGELVFRY ADKMFSLSYE MLDLLNYQKD DAMLFEVGIA DALSKALVSR VLLSVVPNDS SMHLACYEAT HESLMARLRE HKLDMILSDC AGESLKYPEI LSKKLGECGV SFFSADTYSA DFPACLEQGQ LLIPGRRTSL GQQLYRWFDE QNLKVSILGE FDDAAMMKAF GYLKRGIFVT PSIYRQEVIS HGMNLLGETT DVKEEYHVMF AERMIQHPAV KRLLDTDFSD LFAGRDMQVK QC
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