Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3110 |
Symbol | |
ID | 7087888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3687100 |
End bp | 3687810 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461994 |
Product | DNA repair protein RecO |
Protein accession | YP_002359018 |
Protein GI | 217974267 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0026851 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0227356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTG GCTATGTTCT GCATCATCGT CCGTATCGAG AGTCCAGTGT CTTAGTTAAC CTCTTAGTTG ACGGCATTGG ACGGGTCGAT GTGGTTGCCC GAACCGGCAG CGGTAAGCGC TCTATCAAGA GTATTCTCCA GCCCTTTCAA CCGCTGATCT TCGAATTTAG CGGTAAGTCT GAATTAAAAA CCTTAACTCA AGTCGAAGCC GCTGCGCCTG CTGTGCCTCT ATCAGGCCAA AGTTTGTTTG CTGGCATGTA TATCAATGAG TTATTGGTTC GCACTTTGTC TGTGCAGCAC AACGCCGAAG AGTTGTTTCT CATTTATCAT CAAGCTTTAG TCGGCCTTGC CGCGAAGTTT TGCCAATCTC AACTGCGTTA TATTGAGCTC GCCTTGCTGA GAGAATTAGG TTTTATGCCT TCGCTTAGCC GCGATACTCA GGGCGAACCA CTCGTTGCTG AAGATTATTA CCAGCTCGTG CCTGAGTTAG GCTTTCAATT TGTGCTCAAC TCCCGTGCTC GCAATGCCTA TCAAGGTGCC ATGTTGACGG CGCTTAACGA TAACCAACTC ACCGATGTGC ATTTTTTGAG CGCTAAGTTA TTGATGCGCT CCCTGTTAAA GCCATTACTC GGGACTAAAC CTTTGCTGAG CCGACAATTG TTCGTCAGCG CTGCCACGCC AACCAAGATT GATGGGAATA ATTCGCCCTA G
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Protein sequence | MKRGYVLHHR PYRESSVLVN LLVDGIGRVD VVARTGSGKR SIKSILQPFQ PLIFEFSGKS ELKTLTQVEA AAPAVPLSGQ SLFAGMYINE LLVRTLSVQH NAEELFLIYH QALVGLAAKF CQSQLRYIEL ALLRELGFMP SLSRDTQGEP LVAEDYYQLV PELGFQFVLN SRARNAYQGA MLTALNDNQL TDVHFLSAKL LMRSLLKPLL GTKPLLSRQL FVSAATPTKI DGNNSP
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