Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3056 |
Symbol | |
ID | 7088966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3619806 |
End bp | 3620300 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643461940 |
Product | integrase family protein |
Protein accession | YP_002358964 |
Protein GI | 217974213 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0372474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATAT CAAAACAGCC AGACGGCACT TGGAAACTCG ATCTGCGCGT GTCTGGCCGC GATAGCCGCC GGGTGTGTAA AGTGTTTACC ACTAAGGCCG AAGCCTTGAG CTATGAGCGT CATATCCTCA AAGAAGTGGA CGACAAACTT TGGCTGGGCA ATGCCAGCCT ATGGGAGGTC ATGCAGCGTT GGCATGACTT GCATGGCCAG CAACTGGCCG ATGGAATCCC ACAGTCACGC GGCCCACTAT TTAGCTCATG CCGTAAGGCG TTCGCACAGG CCATCAAACG TACCGGACTC ACCTTCCCCG AAGGCCAAAT GACCCATATT TTACGCCACA CCTTCGCCAG CCATTTTATG ATGAACGGCG GCAATATTCT GGTATTAAAA CAAATCCTCG GCCACGCCGA CATCAAAGAA ACCATGCGCT ACGCCCACTT CGCCCCCGAG CATCTGGACG ACGCCATCAC CAAAAACCCA CTGGCGAATT TGTAA
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Protein sequence | MAISKQPDGT WKLDLRVSGR DSRRVCKVFT TKAEALSYER HILKEVDDKL WLGNASLWEV MQRWHDLHGQ QLADGIPQSR GPLFSSCRKA FAQAIKRTGL TFPEGQMTHI LRHTFASHFM MNGGNILVLK QILGHADIKE TMRYAHFAPE HLDDAITKNP LANL
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