Gene Sbal223_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3056 
Symbol 
ID7088966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3619806 
End bp3620300 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content54% 
IMG OID643461940 
Productintegrase family protein 
Protein accessionYP_002358964 
Protein GI217974213 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0372474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATAT CAAAACAGCC AGACGGCACT TGGAAACTCG ATCTGCGCGT GTCTGGCCGC 
GATAGCCGCC GGGTGTGTAA AGTGTTTACC ACTAAGGCCG AAGCCTTGAG CTATGAGCGT
CATATCCTCA AAGAAGTGGA CGACAAACTT TGGCTGGGCA ATGCCAGCCT ATGGGAGGTC
ATGCAGCGTT GGCATGACTT GCATGGCCAG CAACTGGCCG ATGGAATCCC ACAGTCACGC
GGCCCACTAT TTAGCTCATG CCGTAAGGCG TTCGCACAGG CCATCAAACG TACCGGACTC
ACCTTCCCCG AAGGCCAAAT GACCCATATT TTACGCCACA CCTTCGCCAG CCATTTTATG
ATGAACGGCG GCAATATTCT GGTATTAAAA CAAATCCTCG GCCACGCCGA CATCAAAGAA
ACCATGCGCT ACGCCCACTT CGCCCCCGAG CATCTGGACG ACGCCATCAC CAAAAACCCA
CTGGCGAATT TGTAA
 
Protein sequence
MAISKQPDGT WKLDLRVSGR DSRRVCKVFT TKAEALSYER HILKEVDDKL WLGNASLWEV 
MQRWHDLHGQ QLADGIPQSR GPLFSSCRKA FAQAIKRTGL TFPEGQMTHI LRHTFASHFM
MNGGNILVLK QILGHADIKE TMRYAHFAPE HLDDAITKNP LANL