| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3046 |
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| Symbol | |
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| ID | 7088955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3611410 |
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| End bp | 3613155 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643461930 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002358954 |
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| Protein GI | 217974203 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.860652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTAA TGGCTGCAAC TATCAATTTT GATGAGGTAT TAGCTGATCT GGAGCAGCTA
CAACATACCG ATATGCAAAG TGCAATCACT AAGCTCCATG AGCTTGAAGC TGATTTCGAG
CATATGACGC GTTTTCAACA AGGGCGCTTA TTGGTATTTA AAGGGACTTC ATTTATTTAT
GCAGGTCAAT ATCAAGAAGC CCTAGATAAT TTAATTCAAT CTGAAAATTT AGTTCAAAAT
AGCGATTATT TATTTTCTGC CTATAGCTAT GAGGCAACTG CGTACATCGC CCTACGGAAC
TTTAAAGACG CTTTTGTTGT AATGAGCAAA AGCCTAGGGC TAATAGATCG AATAGATAAT
ATAGATATCA AACGTGCTGC ATATCTACGT TTAGCGAGTT TGTACTCTGC AATGGGCATA
AAAGAAGAGG TGGGAACCTA CGCGGCTAAG GCAGAATCGC TTGCTTCAGC AGATAATGTA
AAAGATATTT GTACTGCAAA GTTGTATTTA TCAGTTTATC AATTAGAGCT AGAGGCCTTT
ACTAAGGCGT TTGATGAATT CCAGTACACA CACGATTTTT GTGAGTCTAA TGGCTTCCCA
TTGATTTCGT TTATTGCATT GAAAGGGATG GGTGAGTCTA AGTTAAGGTT GCAAGAATAC
TCTGCTGCAG TTGCTTTACT TTTGAAAGCA TTAAAGGGAT ATGAGTCTTT TAATTTTCAA
CTAGAAATTA ATAGTGTCCA TTCTTTATTA ACCGAAGCGT ATTTTGCACT AAAGCAATCT
GCTGAGGTGG TCGAGCATGC CAAGTTCGTT ACGTCATTAC CTAATGATCC TAGTTATACC
GAGTTAAAAC ATACTGTCTT TAAAGTGTTA GCGGGCTTAA ATGCTGAGAA TAAACAGTTT
GAACAAGCCT ATGAATATTC GAAAAAAGAG CAGTATTACA ATCAGCTGAT GTTTGATGAA
GCGAAAATGA AAACGTTAGC GTATCAGGCG GCAAAGTTTA ATGCTGATGA ACAGTCACGT
GAAATTAATT TATTGAATAA GGAACGTGAA CTGTATGTCG CTCAGCAAAC GGTAAAAGAG
CGCGAATACA CCAATATGCT GATGTTTGTC ACTATCCTAG TAGGCGGACT GTTCTTCCTC
GGGATTTTGT TAGCTGTAGG CCAGATGCAG AAACGCAAGT TTATGCGTAT GGCGAGAATG
GATGCATTAA CAGGCATCTT GAATCGCGGT GCAGGGCAAG AGTTAGGGGA AAACCTTTTT
GTGCAAGCCA CGGCCCGCGG TGGGGATTTC TGTGTCATTT TATTTGATTT GGATTTCTTC
AAACGGATCA ACGATTCTTT TGGCCATGGA ACTGGCGATT GGGCGCTTAA AAAGGTGGTT
GATTCCCTTA AATCCCATAT CCGAAATGGT GATGTTTTTG CTCGTATTGG CGGTGAGGAG
TTTGCGATTT TATTACCCTA TGCCGATGAA GAGAAAGGCA TGGAAGTGGC GGAGCAGTGC
CGAGCCCGTA TCGAGGCCAT TGATACCCAA CATTCAGGAC ATAAGTTCGT CATTACGGCG
AGTTTTGGCG TGAGCGGTTT AATGGCTGAT GATCTGAGTT TGGACCCATT ATTTCACCGA
GCCGACATGG CGCTTTATGC CGCTAAGGCC AATGGCCGCA ATGCCGTAGT ACGCTATTCT
GACATATTAA AATGTGACAA GCAGGCAACA GATTTACGGC GTCATATCGC ATCGCCCTCG
GTGTAA
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| Protein sequence | MPLMAATINF DEVLADLEQL QHTDMQSAIT KLHELEADFE HMTRFQQGRL LVFKGTSFIY
AGQYQEALDN LIQSENLVQN SDYLFSAYSY EATAYIALRN FKDAFVVMSK SLGLIDRIDN
IDIKRAAYLR LASLYSAMGI KEEVGTYAAK AESLASADNV KDICTAKLYL SVYQLELEAF
TKAFDEFQYT HDFCESNGFP LISFIALKGM GESKLRLQEY SAAVALLLKA LKGYESFNFQ
LEINSVHSLL TEAYFALKQS AEVVEHAKFV TSLPNDPSYT ELKHTVFKVL AGLNAENKQF
EQAYEYSKKE QYYNQLMFDE AKMKTLAYQA AKFNADEQSR EINLLNKERE LYVAQQTVKE
REYTNMLMFV TILVGGLFFL GILLAVGQMQ KRKFMRMARM DALTGILNRG AGQELGENLF
VQATARGGDF CVILFDLDFF KRINDSFGHG TGDWALKKVV DSLKSHIRNG DVFARIGGEE
FAILLPYADE EKGMEVAEQC RARIEAIDTQ HSGHKFVITA SFGVSGLMAD DLSLDPLFHR
ADMALYAAKA NGRNAVVRYS DILKCDKQAT DLRRHIASPS V
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