Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3043 |
Symbol | |
ID | 7088952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3604216 |
End bp | 3605865 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461927 |
Product | malate synthase |
Protein accession | YP_002358951 |
Protein GI | 217974200 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.653137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAC ACACTTTGAG TGAACAGCAA TTGAATTCGA CACTGGGTAA AGCTACAGCA AACGCCACGC TTAATATTGT GGGTCGTGAC ATTCCAGGCC AAGAAGTCAT CTTTACCGAA GGGGCTGTCG CCTTACTCGA ATCCCTTTGT CGTGAGTTTG CCGACGAAGT ACCCGCCTTA CTCGCTAAAC GTAAAGATAA GCAAGCGCGT ATCGATAAAG GATCATTACC CGACTTTCTG CCTGAAACCC GCGCTATTCG TGATGGTGCA TGGCAAATTC GCGGTATTCC CGATGACTTG CTTGACCGCC GCGTGGAAAT CACAGGTCCC GTTGAACGTA AGATGGTGAT TAATGCACTC AACGCCAATG CCAAAGTGTT TATGGCCGAT TTCGAAGATT CTTTAGCACC AAGCTGGGAA AAAGTCGTCG AAGGTCAAAT CAATCTACGT GATGCCGTGC GTGGTGATAT TGAGTACACA GCACCGGACA CAGGTAAGCA CTACAAATTA GGACCAAATC CGGCGGTGCT TATTTGCCGC GTTCGTGGTC TGCACCTTAA AGAAAAACAC GTGCAGTTTA ACGGCAAAGC GATTCCTGGC TCACTGTTTG ATTTCGCACT GTATTTCTAC CACAACTATC GCCAACTTTT GGCCAAGGGC AGTGGTCCAT ACTTTTATAT TCCTAAGTTA GAAAGTCATG TTGAAGCGCG CTGGTGGGCA AAAGTATTTG CTTTTGTTGA GGAAAGGTTT TGTCTGCAAG CGGGCACGAT TAAATGTACT TGCCTGATCG AGACGTTACC GGCCGTGTTC GAAATGGACG AAATCCTCTA CGAGCTGCGT TCCAATATCG TCGCGCTGAA CTGTGGTCGC TGGGATTACA TCTTCAGCTA TATCAAAACA TTAAAGCGTC ATAGCGACCG TGTTTTACCG GATCGCCAAG CCGTCACTAT GGATACGCCT TTCTTAAGTG CTTATTCAAG ACTCTTGATT AAGACCTGCC ACAAACGCGG TGCGTTAGCG ATGGGCGGCA TGGCGGCCTT TATTCCAGCT AAAGATCCGG TTCAGAACGA AGCGGTATTG CAGCGAGTTC GTCGAGATAA AGAGCTCGAG GCGCGTAACG GCCACGATGG CACTTGGGTG GCACACCCTG GTCTTGCCGA TACCGCTATG GGTATTTTCA ACGAATACAT AGGTCAAGAT CACTGTAATC AATTGCATAT TACCCGTGAT GTCGATGCGC CAATCCTGGC TAGCGAACTG CTTAAAACCT GCGACGGTGA GCGCACCGAA CAGGGGATGC GTCTGAACAT TCGTATCGCA CTGCAGTATT TAGAGGCTTG GATCAGCGGC AACGGTTGCG TACCTATTTA CGGCTTAATG GAAGATGCAG CTACAGCTGA GATTTCTAGA GCCTCAATTT GGCAATGGAT CCAACACGGT AAGTCGCTGT CAAACGGCAA ACTCGTGACC AAGCAACTCT TTAAAGACAT GTTGGTTGAA GAGCTGTCGA ACGTGAAAAA AGAAGTGGGT AGCGACAGAT TCACCCATGG CAAATTCACC CAAGCGGCGG TATTGCTCGA AGACATTACC ACCTCCGACG AGCTGGTCGA TTTCTTAACC TTACCCGGTT ACGAAATGCT GACTGCCTAG
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Protein sequence | MTEHTLSEQQ LNSTLGKATA NATLNIVGRD IPGQEVIFTE GAVALLESLC REFADEVPAL LAKRKDKQAR IDKGSLPDFL PETRAIRDGA WQIRGIPDDL LDRRVEITGP VERKMVINAL NANAKVFMAD FEDSLAPSWE KVVEGQINLR DAVRGDIEYT APDTGKHYKL GPNPAVLICR VRGLHLKEKH VQFNGKAIPG SLFDFALYFY HNYRQLLAKG SGPYFYIPKL ESHVEARWWA KVFAFVEERF CLQAGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT LKRHSDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPVQNEAVL QRVRRDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HCNQLHITRD VDAPILASEL LKTCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG KSLSNGKLVT KQLFKDMLVE ELSNVKKEVG SDRFTHGKFT QAAVLLEDIT TSDELVDFLT LPGYEMLTA
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