| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3037 |
|---|
| Symbol | |
|---|
| ID | 7088946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3597692 |
|---|
| End bp | 3598297 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643461921 |
|---|
| Product | transcriptional regulator BetI |
|---|
| Protein accession | YP_002358945 |
|---|
| Protein GI | 217974194 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.116716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAG CCGCAATGAA ATTGATACGC AGACAGCAGC TTATCGATGC GACATTAGCA
TCGGTTGCCT TGCATGGATT GCAGCACACG ACTATCAACA GCATTAGTCA GTTGGCGGGG
ATGTCGTCGG GGATCATCAG TCATTATTTC AGTGGTAAGC AGGGCTTGAT CCAAGCGACG
CTACGCCACT TGCTCGAGCA GTTAAAGCAG GCGTTGCTCA ATCGAATCCA AGGTCAAGTA
TTGGCGCCAA CAGAGCGCTT AATGATGATA GTTGAAGCGA ATTTTACCGA GTTACAGCGC
TCACGAAATG TCACTCACAC TTGGCTGAGT TTTTGGGCGC AGGCCGTCCA CGATCCCCAG
TTAGCCCGTT TGCAGAATAT TAATAGTCGT CGTTTATACA GCAACTTACA TTTTTCCTTT
CGGCAAGTGT TGCCCAAAGA GTTTGCCTTG ATGGCTGCTG AGCAAACGGC GGCGATGATC
GATGGATTTT GGTTACGCAG CGCCTTAAGT GAAACCCCTG AGCAGGATTT TGTTCAGGCC
GAAAAATTAT GCAAAACCTT TATCCACAAT GTGATAAAGC AGCATGGAGT CAAAACATGT
CAGTAG
|
|---|
| Protein sequence | MPKAAMKLIR RQQLIDATLA SVALHGLQHT TINSISQLAG MSSGIISHYF SGKQGLIQAT
LRHLLEQLKQ ALLNRIQGQV LAPTERLMMI VEANFTELQR SRNVTHTWLS FWAQAVHDPQ
LARLQNINSR RLYSNLHFSF RQVLPKEFAL MAAEQTAAMI DGFWLRSALS ETPEQDFVQA
EKLCKTFIHN VIKQHGVKTC Q
|
|---|
| |