| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3035 |
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| Symbol | |
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| ID | 7088944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3594543 |
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| End bp | 3596228 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461919 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_002358943 |
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| Protein GI | 217974192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.82163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCATT CACTTCAGCA AAAATATTAT AACTACATCA TAGTCGGCGC CGGTTCTGCA
GGGTGTGTGC TCGCTAATCG TCTGTCTAAG GATCCTAAAA ACGAAGTACT GTTATTAGAA
ACCGGTGGCA GCGATAAGAG CATCTTTATT CAGATGCCGA CGGCGTTATC GATTCCGATG
AACAGCCCTA AATATGCTTG GCAGTTTGAG ACGCAGCCTG AGCCGCATTT AGATAATCGC
AAGATGCATT GTCCTCGGGG CAAAGTGCTT GGCGGTTCAT CTTCGATCAA CGGCATGGTG
TATGTCCGTG GTCATGCCAG GGACTTTGAT GAGTGGCAGG CGCAAGGGGC GACCAACTGG
GATTATAGCC ATTGCTTGCC GTATTTTAAA AAGGCAGAAA CCTGGGCCTT TGGTGGCGAT
GAGTATCGCG GCGAGTCTGG GCCGTTAGGC GTGAATAACG GCAACCAGAT GCAAAATCCC
TTATACCAAG CCTTTGTGGA TGCGGGCATC GCGGCGGGGT ATTTATCGAC CGCCGATTAT
AATGCGGCGC AGCAAGAAGG TTTTGGTCCC ATGCACATGA CGGTCAAAAA AGGCGTGCGT
TGGTCTACCG CTAATGCTTA TTTACGCCCG GCGATGGCCA GACGTAATCT CACTGTGTTG
ACCCACACCT TAGTGCATAA AGTGTTATTG GAAGGGCAAG CGGCCGTTGG CGTTCGCATT
GAGCACAAAG GTAAAGTTGA AGATATTCGC TGCAATAAAG AAGTGATTTT AGCTGCTGGC
TCAATAGGTT CGCCGCATTT GTTGCAATTA TCAGGTATTG GCGATCCCCA AGTATTGGCC
GATGCAGGGG TCGAGTTACA ACATGAGTTG CCCGGTGTCG GTCAGAATTT ACAGGATCAT
TTAGAGTTTT ATTTCCAATT CAAATGCCTT AAACCGATTT CACTCAATGG CAAGTTAGAT
CCTTTCAGCA AGTTCTTAAT CGGTGCTCGG TGGATCTTAG ATAAGTCTGG CCTAGGGGCC
ACGAATCACT TTGAATCCTG TGGTTTTATT CGCTCAAAAG CGGGTCTCGA GTGGCCAGAT
TTACAGTACC ACTTTTTACC TGCGGCTATG CGTTACGATG GTAAAGAAGC CTTTGCGGGG
CATGGTTTTC AGGTACATGT AGGCCATAAC AAGCCTAAAA GCCGTGGTGC CGTGACCTTA
GTGTCGGCAG ATCCTAAAGC GCCACCTAAG ATCCAGTTCA ATTATTTACA GCATCCTGAT
GATATTGAAG GCTTTAGAGC CTGCGTGCGT TTAACCCGTG AGATCATCAA TCAAGCGCCA
TTCGATGAGT ATCGCGGCGA GGAAATTCAA CCCGGCACAC AAGTGCAAAC CGATGAGCAA
ATCGATGCCT TTGTGCGTCA ATCGGTTGAG AGTGCTTATC ATCCTTCTTG CTCGTGCAAG
ATGGGCACAG ATGCGATGGC GGTGGTGGAT CCTGAAACTC GCGTGCACGG CTTGCAGAAT
TTACGGGTGG TGGATTCTTC TATTTTCCCG ACTATCCCGA ACGGTAATTT GAACGCGCCG
ACCATCATGT TGGCTGAGCG CGCCGCGGAT ATGATCTTAG AGGCTGAGAT GTTAGCGCCG
GCGGATTCCG CCGTTGTGGT TGCCGACGCT TGGCAAACCA CACAAAGAAG CACTGCGACA
AGTTAA
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| Protein sequence | MTHSLQQKYY NYIIVGAGSA GCVLANRLSK DPKNEVLLLE TGGSDKSIFI QMPTALSIPM
NSPKYAWQFE TQPEPHLDNR KMHCPRGKVL GGSSSINGMV YVRGHARDFD EWQAQGATNW
DYSHCLPYFK KAETWAFGGD EYRGESGPLG VNNGNQMQNP LYQAFVDAGI AAGYLSTADY
NAAQQEGFGP MHMTVKKGVR WSTANAYLRP AMARRNLTVL THTLVHKVLL EGQAAVGVRI
EHKGKVEDIR CNKEVILAAG SIGSPHLLQL SGIGDPQVLA DAGVELQHEL PGVGQNLQDH
LEFYFQFKCL KPISLNGKLD PFSKFLIGAR WILDKSGLGA TNHFESCGFI RSKAGLEWPD
LQYHFLPAAM RYDGKEAFAG HGFQVHVGHN KPKSRGAVTL VSADPKAPPK IQFNYLQHPD
DIEGFRACVR LTREIINQAP FDEYRGEEIQ PGTQVQTDEQ IDAFVRQSVE SAYHPSCSCK
MGTDAMAVVD PETRVHGLQN LRVVDSSIFP TIPNGNLNAP TIMLAERAAD MILEAEMLAP
ADSAVVVADA WQTTQRSTAT S
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