| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3029 |
|---|
| Symbol | |
|---|
| ID | 7088938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3586427 |
|---|
| End bp | 3588853 |
|---|
| Gene Length | 2427 bp |
|---|
| Protein Length | 808 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643461913 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_002358937 |
|---|
| Protein GI | 217974186 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGG AAAAGTTGCT GTATTTGCGG GGGGTTGGAG CAGAATTTAC TGATTGTTTT
GGCCAAGAGA TCCATATTTC CGAGGTAGAC AGGCAAGGTA TCTTGACCTG TATGTTACAG
GAAAAAAACA CTGTGGCAGG GACTGCCATT GATGCTTCTG CTACAGAGGC GTTATCGAGT
GATGCTGGGC TGACTAACGT CGATGCGGTA TTGACCGAAG CGCTGATCGC CTCACAAATT
GACTTGCTGG ATGCCCGTCC TTGGACTCAG GTGTTACCCG AATTCCATTG GTGTTTTGTG
GATGAACCTT GGATAAGCCT TTGTTTACCC GAAACCTATA CTTCAGATCT GAGTGTGGCG
ATTGAATGCG AACAGGGTGA GTCTATCGTA TTTGATGTGC CGTTCTCGGC GCTTAAGTCG
ATTGGCGATT ACCGCATTGA ACAAACGCTT TATCTCCACT ATCGCCTTGA TCTTACGCAA
CTGGGATTAG CACGCCTCGA TTTAGCAGAG GCCAAGACCC AAGCTTCCCC TGAACACTCA
ATGACCGCCG AGACTGAGGC GGTGAATTTA GCGTCCTATT TCCTGAGCAG CCAAGAGTTC
ACTAACAACC CAGCCTTAAT CAAAAACCAA GACTCATTTG CGCATGCAGC CGACAAAAAT
GCGAGTGATT TCTCTGTGTT AGGTTTGGGC TTTCATCGTA TAGCTTTAAG CTTAAAACAT
GCTCTAGATA CCAGTGCACC AGCGCCAAGC TCAGCGCTAC AGAGCAGTGT GACGGCTGAG
GCTGATACCA GCACTTTGTT TTCTGGCACC TTAATGGTGG CACCGCGGGC CGCTTATCAA
GGCGTACTCA CGGCTGTCGC CCAAGGTAAG CGCCATAAAC CTTGGGGGAT CAGCGTTCAA
CTCTACAGTT TACGCAGCGA GACCCAATGG GGCATTGGTG ACTTTGGCGA TTTAGAACAA
CTGATCGCGC TGGTGGCGGC GCAGGGCGCG GATTTCATTC AACTCAATCC CTTGCATGCC
CTCGACATTG CGGCGCCAGA GCATCCGAGT CCCTATAGTC CGTGCGATCG CCGCAGACTC
AATCCTCTTT ATATTCAATT ACAAAGCGTT CCTGAATACC AAGCACTTAC CACTGAATTT
TCAAGCGCTA CTTGGATAGA GGCCATCGCC TTACTGAATC GTGACAATTG GCTCGATTAT
CCTAAGGTGA GTGAGCTCAA ATACCGTGCC TTTGAGCAGT TATATCGCGT TTTTTGTGAA
ACCCATTTAG CAAACGACAC GCCCAGAGCG CAAAGATTCC ATGAGTTTGT GCGTGAGCAG
GGCACTGCGC TGCAAGAGTT TGCTCAAGCG GAATACTTAC GTAGCCCAAA AGCGTTTGTA
CAAGAGGAAG GTTTCTATCT TTACCTGCAA TTTGTGGCCG AAAACCAGTT ACACCTTTGC
CAGCTAAAAG CGAAAGAAGT GGGTATGGGG TTGGGATTAA TCCGCGATTT GGCCGTTGGC
GCAGCGCTGC AGGGCAGTGA AGTACAGGCC AATGCCGAGC AGTTTTGTTT GCATGCCAGT
ATCGGCGCAC CGCCCGATCC CTTTGCGCCC CAAGGGCAAA ATTGGGGCTT AACGCCCCTC
GATCCGGTGA AGTTAAAACA ACATAATTTC AGTCATTTTA TCTCCTTGAT CCGCGCCAAT
ATGGAAAGCT GTGGCGCCTT GCGTATCGAT CATGTGATGG GCTTACTGCG CCTCTGGTGG
TGGCCACTGG ATAAACAACT CGGCCACGGT GCCTATGTGT ATTATCCCGT TGAAACCATG
CTCGCTATCG TTTGCCTTGA GAGTCAACGC GCCCGCTGTG TGGTGATTGG TGAAGACTTA
GGGCTAGTGC CACCGGACAT TATTCATCGT CTCTACACTT CTGGCATTTA CTCCAACGAA
TTGTTCTATT TCTGCAAAGA CCATCAAGGC TTTAAATCAC CGGATCAATA CAAGTCCCAG
AGCCTGATGA TGCTGGCGAA CCACGATGTA CCGACTTTAG TAGCTTGGTG GTGTGGCAGC
GATTTGCACC TGCGTCGACA GTTATCCCTA TTTGATTCTG ACGAACAATT GGGCGATGCG
CTCGCAGGGC GGGAGCATGA AAAGCAGCAG CTTATTTCAC TGTTAGCCGC TCAAGGTCTG
TTAGCCGAGG TGACGATAGC CGAACTCGAT ATTCAAACCT TGCTCACGGC TTGGATGACC
CTAGGGGCTC GCGGAAATAG TGCGCTGTAC AGCGTGCAAC TGTGTGATTT ATTAGCCGAT
CGCCATGCGG TGAACATTCC CGGCACTTGG CTCGAATATC CTAACTGGCA GCGGCGCTTA
CCTTTGAGTT TAACGCAAGT GTCGGCTTCG CCAGAGATAT TGCAGCGATT ACAAAATATC
GCTGCGGCGA GACAGCTACC GAGTTAA
|
|---|
| Protein sequence | MGLEKLLYLR GVGAEFTDCF GQEIHISEVD RQGILTCMLQ EKNTVAGTAI DASATEALSS
DAGLTNVDAV LTEALIASQI DLLDARPWTQ VLPEFHWCFV DEPWISLCLP ETYTSDLSVA
IECEQGESIV FDVPFSALKS IGDYRIEQTL YLHYRLDLTQ LGLARLDLAE AKTQASPEHS
MTAETEAVNL ASYFLSSQEF TNNPALIKNQ DSFAHAADKN ASDFSVLGLG FHRIALSLKH
ALDTSAPAPS SALQSSVTAE ADTSTLFSGT LMVAPRAAYQ GVLTAVAQGK RHKPWGISVQ
LYSLRSETQW GIGDFGDLEQ LIALVAAQGA DFIQLNPLHA LDIAAPEHPS PYSPCDRRRL
NPLYIQLQSV PEYQALTTEF SSATWIEAIA LLNRDNWLDY PKVSELKYRA FEQLYRVFCE
THLANDTPRA QRFHEFVREQ GTALQEFAQA EYLRSPKAFV QEEGFYLYLQ FVAENQLHLC
QLKAKEVGMG LGLIRDLAVG AALQGSEVQA NAEQFCLHAS IGAPPDPFAP QGQNWGLTPL
DPVKLKQHNF SHFISLIRAN MESCGALRID HVMGLLRLWW WPLDKQLGHG AYVYYPVETM
LAIVCLESQR ARCVVIGEDL GLVPPDIIHR LYTSGIYSNE LFYFCKDHQG FKSPDQYKSQ
SLMMLANHDV PTLVAWWCGS DLHLRRQLSL FDSDEQLGDA LAGREHEKQQ LISLLAAQGL
LAEVTIAELD IQTLLTAWMT LGARGNSALY SVQLCDLLAD RHAVNIPGTW LEYPNWQRRL
PLSLTQVSAS PEILQRLQNI AAARQLPS
|
|---|
| |