| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3027 |
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| Symbol | |
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| ID | 7088936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3581878 |
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| End bp | 3584079 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461911 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002358935 |
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| Protein GI | 217974184 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGC CCACGGCTGA TGATATCAAG CTCAACCCTG ACGCTAAACA TAACCCTTCT
CAAAATGAGA AATGGGCCTT GGGGGCAGGT GAGCCTTTTC CGCTCGGTGC GAGTGTCGAG
GGTGATGGCG TCAACTTTGC GTTATTTTCA GCTAACGCGA CAGCGGTCGA GTTATGCCTA
TTTGATGACA ATGGCGAGCA AGAAATCGCG CGGATTGCGT TAACTGAACA AACCCAGCAA
ATCTGGCATG TGTTTGTGCA GGGGCTCAAG GCGGGGCAAC TCTACGGCTA TCGCGTTTAT
GGCTCCTATG AGCCTCAGCT TGGCCACAGA TTTAACCCCA ATAAGTTATT GCTCGACCCT
TATGCGCGCC AGCTGGTCGG TGAATATAGC GACCATGAGT CTAACTATGG TTACGAGCTG
AATCACAAGG ATGAAGACTT ATCTTTCAGT AAGTTAGATA ACGCTGCCCA TGTGCCAAAA
TGTAAGGTCG TAGACATTCG TCCATTAATC GACATCGCCG CTAAGCAGTC GATTCAGCCC
GTAGCGACGA GGTTTCAGCC CAAACCCCTA GAGCGCAGCA TTATTTATGA GATGCACGTT
AAAGGCTTTA CGGCGGCGCA TCCTGAGATT GAACCTAATA AACGCGCCAC CTTTGCGGGT
TTAGCGACTC AGCCTGCTAT CGATTATTTG GCCGAACTTG GGGTGACGTG CGTCGAGTTA
CTTCCAGTAC AGGCCTTTTT TACTGAACCG TTTTTGCTCG AGAAAAAGCT TACTAATTAT
TGGGGTTACA ACAGTATTGG CTTTTTTGCC CCCGAGCCGA GTTATCTGTC ATCCGACGAT
ATTGGTGAGT TTCGCGCTAT GGTGGATGCA CTCCACGGTG CGGGTATCGA AGTGATCCTC
GATGTGGTCT ATAACCACAG CGCCGAGGGC AGTCGACTTG GGCCAACCTT TAGTTTTCGT
GGCATAGATA ATCTCAGTTA TTACCGCCTA CATCCGAATG ATAAGCGTTT TTACATTAAC
GATACGGGTT GCGGAAACAC CTTAAATATC AACCATCCAC GCATGTTGCA GCTCGTGTTA
GATTCGCTGC GTTACTGGGT AGAAATCATG GGCGTCGATG GATTTCGCTT CGACTTAGCG
GCCTGTTTAG GTCGCGAGGC CTATGGTTTT GATCCCGGCT CAGGTTTCTT CGATGCATTG
TTGCAAGACC CTGTGTTGTG CCGAGTAAAA TTGATTGCTG AGCCTTGGGA TATTGGCCCT
GGCGGTTATC AATTAGGTAA TTTCCCCGTG GCTTTTAGCG AGTGGAATGA CAGATACAGA
GACACTATGC GCCGTTTCTG GCGCGGCGAT CACAGTATGT TGCCCGAATT TGCTCGGCGA
TTTCACGGCT CGGGGGATTT CTTCGAGCAT GGCGGCCGTC CGCCTGCGAC CAGTCTTAAC
TTTTTAACTA GTCACGACGG TTTTACCCTC AAAGATTTAG TGAGTTATAC CCAGCGCCAC
AACTTGGCGA ATGGGGAAGA TAATCGCGAC GGCCACCAAG AAAACTTCAG TCATCATTAT
GGGATTGAAG GGGAAACCGA AGATAGCGCA ATTCTGGCAC TTCGCAGCCG TCAACAGCGT
AACTTATTGA CGACACTATT TTTATCCCAA GGTGTGCCTA TGTTGTTGAG CGGCGATGAA
ACGGGCCGCA CCCAGCAAGG CAACAATAAT GCCTATTGCC AAGACAATGA ACTGAACTGG
TTTGATTGGT CGGCAAAGGG CATGGACACT GAGCTGTTAG CCTTTACTCA GCAGCTTATC
GCCCTGCGCA AACGTTTCCC GTTGTTATGC GCGAAACGCT TCATTCATGA ACAGTTATTG
GCCGAATCTT TAGCCGATAC CGGTGCTCGC TTAGATTGGT TTAGTCGTCA AGGTGAGCAA
ATGACCAAGA GCCTGTGGAC TGAATCTATG TGCCGCAGTT TATCTGTAGT GCTTTCTGGT
GACTTAGAAG GCCAAGGTAA GCAGCAAGCT CTGCTGTTGA TGGTCAACGC CGACGATAAT
CCTTTGGCAT TTACGCCGCC GACCTTTGAA CACTTGAGTC CGTGGCAATG CCTGATCCAT
ACCCAAACTG AGCCGCTGGA TGCTCAGATC TCTACGACGC GATACTTGCT GCAAGATCGC
AGTCTCATGC TTTTTCATGC TGATTTGATT TTCAAGAAAT GA
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| Protein sequence | MQKPTADDIK LNPDAKHNPS QNEKWALGAG EPFPLGASVE GDGVNFALFS ANATAVELCL
FDDNGEQEIA RIALTEQTQQ IWHVFVQGLK AGQLYGYRVY GSYEPQLGHR FNPNKLLLDP
YARQLVGEYS DHESNYGYEL NHKDEDLSFS KLDNAAHVPK CKVVDIRPLI DIAAKQSIQP
VATRFQPKPL ERSIIYEMHV KGFTAAHPEI EPNKRATFAG LATQPAIDYL AELGVTCVEL
LPVQAFFTEP FLLEKKLTNY WGYNSIGFFA PEPSYLSSDD IGEFRAMVDA LHGAGIEVIL
DVVYNHSAEG SRLGPTFSFR GIDNLSYYRL HPNDKRFYIN DTGCGNTLNI NHPRMLQLVL
DSLRYWVEIM GVDGFRFDLA ACLGREAYGF DPGSGFFDAL LQDPVLCRVK LIAEPWDIGP
GGYQLGNFPV AFSEWNDRYR DTMRRFWRGD HSMLPEFARR FHGSGDFFEH GGRPPATSLN
FLTSHDGFTL KDLVSYTQRH NLANGEDNRD GHQENFSHHY GIEGETEDSA ILALRSRQQR
NLLTTLFLSQ GVPMLLSGDE TGRTQQGNNN AYCQDNELNW FDWSAKGMDT ELLAFTQQLI
ALRKRFPLLC AKRFIHEQLL AESLADTGAR LDWFSRQGEQ MTKSLWTESM CRSLSVVLSG
DLEGQGKQQA LLLMVNADDN PLAFTPPTFE HLSPWQCLIH TQTEPLDAQI STTRYLLQDR
SLMLFHADLI FKK
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