| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3019 |
|---|
| Symbol | |
|---|
| ID | 7088928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3569138 |
|---|
| End bp | 3569899 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461903 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002358927 |
|---|
| Protein GI | 217974176 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.683657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACTCA GCAAAGCCTT TGCACAAGTC GTCCTTTTGG CGCTCAGCAG CCTTTGCTTG
ACTGCGCAGG CAAAAGACCT GCTCGCGGTG GGTGCGAGCT TCAGCCAAAT TTTCGAACTA
CAGCCTAATG GCGAATATAC CGGCTTAGGT GTCGATATTT TAAATCGCTT CGCCCAGCAG
CAAAGTGTGA ACATTCACTA TCAAATTACC CCTTGGCGCC GCGCCATTTC TATGGTCGAA
CGTGGCCAAG CGGATATTCT TATTGGTCCC TACGATACCC CAGAGCGTGA AGCGAACTTG
GCTTTTGCGA CGAAAGCGTT TTACCGCGAT AACATGGTGT TCTATGCCCG TGTAGGCCAT
GAAATAATCT GGAATGGCGA CTATGCCAGC ATTAAAGGTC AACGGATTGG TAAGATGCAG
GGTTGGAGTT ATGGCCCGAC GTTTAATGAA CAAACTAAAT CATTGAACAT CAATGAATTT
GTCGATATTA AAAGCGGAAT AGAACGCCTC TCTCGGGGGG ATTTAGATTT ACTCGCCACA
AACAGCCGTA ATACCGATGC CGTGCTCGCC CAAATCAAAA TCCCTAAGGC AATTACCCCA
ATCACGCCGA TAATCGATGT TCAAGACGGT TTTATGGCGT TTCCGAAACA GGCGAAATTT
GATCCCTTAA GACATAGGTT TGACAGCTTT TTCGATGAGA TGATCCAAAA TGGCACCTTT
ACGACACTCG GCCAAAAATA TCGCGTAACC TTGCCTTACT GA
|
|---|
| Protein sequence | MILSKAFAQV VLLALSSLCL TAQAKDLLAV GASFSQIFEL QPNGEYTGLG VDILNRFAQQ
QSVNIHYQIT PWRRAISMVE RGQADILIGP YDTPEREANL AFATKAFYRD NMVFYARVGH
EIIWNGDYAS IKGQRIGKMQ GWSYGPTFNE QTKSLNINEF VDIKSGIERL SRGDLDLLAT
NSRNTDAVLA QIKIPKAITP ITPIIDVQDG FMAFPKQAKF DPLRHRFDSF FDEMIQNGTF
TTLGQKYRVT LPY
|
|---|
| |