Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3012 |
Symbol | |
ID | 7088921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3559243 |
End bp | 3560421 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643461897 |
Product | AAA ATPase central domain protein |
Protein accession | YP_002358921 |
Protein GI | 217974170 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0560147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGG TATTACTACA AATAAAGGCG CTCACCAATG GTGATCCTTT GTTGACGGCT GTCATTGTTG GAGTATTAAC ATTAACGTTA ATTGGACTCG TAGGCTACAT GCTAAAAGAT GTCCCCGCGA AGCTGTTAAG TTGGCTCAGT TGCCTGCTGC TTGTGCGGCT CACTATCGAC GATAGCCATC AGGCGCGCAC AGAGGTATTC AATAAACTGT CCTTTTTGAT CAGTAATACT ACCATTCCGT TTTTTTCACG CTCTATCTCT GAGGCTGTGT ACTTTGACTA TAGTATGAGT TACGACGGGC GTGTCAGTGT TAAGTCTATC GGCTACGGTA TGCACCTGTT TAAATACCAT GGTTGTATCA TGTTGGCTAC CCGTACTAAG GTCGATAGTA CGATGGCATA CGATACTATT ACTGTAAGTG CACCATGGTG GGCAAAAGAT AAACTACATA GTTTTTTAGA AGATACTCGT GGAGACATCT CTACTGAGCC GAAAGTTAAT ATTTTCGAAG AAACCGAATG GTGTCGCTAT GGCATATTGA AATCATCGGG TTTTAGTGAA TTAGTGCTAG ATGAAGGGTT TAAGCAGGAG TTGATGGGGG AAGTTGATAA CTTCGCAAGT AGGGGGGAAT CGGTTGTAAG TAAGCTAACC ATACTGTTAC ATGGAAAAAC GGGTACGGGT AAGACGGGTA TAGCGAGAGC CTTAGCCGTT GAGTATCATC GCGATCTATA CATATTGAAT CTATCGACTG TAAATGATGC CACTATTCAT AAGGCTATTA GAAAAGTATC GCCCGGAGCT ATGTTGTTAA TCGAGGACTG TGACTGTGTA AAGGCTACGG TATCACGAAC TGCTGAAAGC AATGCAGATA ACCCACCACT CACTTTAGGT GGCGTTCTAA ACGCGTTAGA CGGAATCATT CCTCTTGATG ACTGCCTTGT AATAATGACC ACAAATCATC CTGATAATCT TGACCCCGCG TTAATACGTA AAGGTCGTGT AGATGTCAGT ATTGAAGTAC CACTTATTAG TGCAAAACAA GTTAATGAAG ACTACTTTGA ACGTTTTGGC GCAGTTCTTA ATAGAACTGA GCCATTGTTA GGTTGTGAAG TCTATGAACT CCATCGCAGA GCGAACTTAA GATATGGTGT GTGTTGTAAG CCAGTGTAA
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Protein sequence | MNEVLLQIKA LTNGDPLLTA VIVGVLTLTL IGLVGYMLKD VPAKLLSWLS CLLLVRLTID DSHQARTEVF NKLSFLISNT TIPFFSRSIS EAVYFDYSMS YDGRVSVKSI GYGMHLFKYH GCIMLATRTK VDSTMAYDTI TVSAPWWAKD KLHSFLEDTR GDISTEPKVN IFEETEWCRY GILKSSGFSE LVLDEGFKQE LMGEVDNFAS RGESVVSKLT ILLHGKTGTG KTGIARALAV EYHRDLYILN LSTVNDATIH KAIRKVSPGA MLLIEDCDCV KATVSRTAES NADNPPLTLG GVLNALDGII PLDDCLVIMT TNHPDNLDPA LIRKGRVDVS IEVPLISAKQ VNEDYFERFG AVLNRTEPLL GCEVYELHRR ANLRYGVCCK PV
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