Gene Sbal223_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3012 
Symbol 
ID7088921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3559243 
End bp3560421 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content42% 
IMG OID643461897 
ProductAAA ATPase central domain protein 
Protein accessionYP_002358921 
Protein GI217974170 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0560147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGG TATTACTACA AATAAAGGCG CTCACCAATG GTGATCCTTT GTTGACGGCT 
GTCATTGTTG GAGTATTAAC ATTAACGTTA ATTGGACTCG TAGGCTACAT GCTAAAAGAT
GTCCCCGCGA AGCTGTTAAG TTGGCTCAGT TGCCTGCTGC TTGTGCGGCT CACTATCGAC
GATAGCCATC AGGCGCGCAC AGAGGTATTC AATAAACTGT CCTTTTTGAT CAGTAATACT
ACCATTCCGT TTTTTTCACG CTCTATCTCT GAGGCTGTGT ACTTTGACTA TAGTATGAGT
TACGACGGGC GTGTCAGTGT TAAGTCTATC GGCTACGGTA TGCACCTGTT TAAATACCAT
GGTTGTATCA TGTTGGCTAC CCGTACTAAG GTCGATAGTA CGATGGCATA CGATACTATT
ACTGTAAGTG CACCATGGTG GGCAAAAGAT AAACTACATA GTTTTTTAGA AGATACTCGT
GGAGACATCT CTACTGAGCC GAAAGTTAAT ATTTTCGAAG AAACCGAATG GTGTCGCTAT
GGCATATTGA AATCATCGGG TTTTAGTGAA TTAGTGCTAG ATGAAGGGTT TAAGCAGGAG
TTGATGGGGG AAGTTGATAA CTTCGCAAGT AGGGGGGAAT CGGTTGTAAG TAAGCTAACC
ATACTGTTAC ATGGAAAAAC GGGTACGGGT AAGACGGGTA TAGCGAGAGC CTTAGCCGTT
GAGTATCATC GCGATCTATA CATATTGAAT CTATCGACTG TAAATGATGC CACTATTCAT
AAGGCTATTA GAAAAGTATC GCCCGGAGCT ATGTTGTTAA TCGAGGACTG TGACTGTGTA
AAGGCTACGG TATCACGAAC TGCTGAAAGC AATGCAGATA ACCCACCACT CACTTTAGGT
GGCGTTCTAA ACGCGTTAGA CGGAATCATT CCTCTTGATG ACTGCCTTGT AATAATGACC
ACAAATCATC CTGATAATCT TGACCCCGCG TTAATACGTA AAGGTCGTGT AGATGTCAGT
ATTGAAGTAC CACTTATTAG TGCAAAACAA GTTAATGAAG ACTACTTTGA ACGTTTTGGC
GCAGTTCTTA ATAGAACTGA GCCATTGTTA GGTTGTGAAG TCTATGAACT CCATCGCAGA
GCGAACTTAA GATATGGTGT GTGTTGTAAG CCAGTGTAA
 
Protein sequence
MNEVLLQIKA LTNGDPLLTA VIVGVLTLTL IGLVGYMLKD VPAKLLSWLS CLLLVRLTID 
DSHQARTEVF NKLSFLISNT TIPFFSRSIS EAVYFDYSMS YDGRVSVKSI GYGMHLFKYH
GCIMLATRTK VDSTMAYDTI TVSAPWWAKD KLHSFLEDTR GDISTEPKVN IFEETEWCRY
GILKSSGFSE LVLDEGFKQE LMGEVDNFAS RGESVVSKLT ILLHGKTGTG KTGIARALAV
EYHRDLYILN LSTVNDATIH KAIRKVSPGA MLLIEDCDCV KATVSRTAES NADNPPLTLG
GVLNALDGII PLDDCLVIMT TNHPDNLDPA LIRKGRVDVS IEVPLISAKQ VNEDYFERFG
AVLNRTEPLL GCEVYELHRR ANLRYGVCCK PV