Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3004 |
Symbol | |
ID | 7089072 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3547057 |
End bp | 3548273 |
Gene Length | 1217 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643461889 |
Product | hypothetical protein |
Protein accession | YP_002358913 |
Protein GI | 217974162 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000171981 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000862956 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTTCAA CAATTAAACG AACTCAACGT GATTATTCCC TCGCTTTTAA ATTGGCCGTT GTCGACCAAG TGGAAAAAGG CGAGCTGACT TATAAGCAGG CCCAAGACAA GTACGGTATT CAAGGTTGTT CCACCGTGTT AGTTTGGCTT CGCAAACATG GAAAACTGGA TTGGTCCCAA GGAACACCAT CTACATCAAT GCGAGGACAT TTAATGACTG AGCCCACCAC ACTCACTCCC GAGCAAAAGA TAAAAGCACT CGAAGCCGAA CTTGAAGATA CCCGCATGAA AGCCGCGTTC TTCGAAGCCA TTGTCGAAAA ACTTAGAACT GACTACGGGA TTTCTGTCGT AAAAAAGCCA CGAGCGAAAC GCTCCAGGAA AAAACGGCCA TAGGTTATCG CGTCACCCAA TGCTGTCGCT ACCTCGGGAT TAGCCGTCAG GCGTATTATC AGCAATGTCA GCGGCAAAAA GTATCAGAGC AGAGGGAGCA ACACGTGTTG CAAACGGTGC AATATGAACG GTTATTTCAA CCACGAATAG GTACACGCAA GTTGCAGTAT TTACTGAATA AATCACATCA AATAGTGATT GGGCGAGACA GGTTATTTAG CAGCCTCAGA GCGCATCGTT TGTTGGTCGC ACCTAAACGG GCGTACCACA AAACGACTCA CAGTCATCAT CGATTTAGGT GTCATCCCAA CTTGCTTAAG CCCAGTGAGC AACAAGTGGA CATCACTCGC TCAGAGCAAG TCTGGGTGGC TGATATTACC TATCTGCCAC TGCAAAATAA TGAAGCCTAC TTAAGCCTGG TGACCGATGC CTGGTCACGA AAAATCGTGG GCTATCATGT TGATGATAAT CTCAAAACAG ATGGTGTGCT AACAGCGTAC AAACAGGCAC TGAGGCAGCG GCAAGACAAA GATAAACCGC TGATACACCA CTCAGATCGA GGAATACAAT ACTGCTCAAA CGCTTATCAA GCGGTTCACA CACATCATGG TGTGACATGC TCAATGACAG ACGGATATGA CTGCTATCAA AATGCATTAG CAGAACGCGT AAATGGCATA TTGAAGCAGG AGTTTTTAAC ACATAAGCCA GCAACGCTGC AGGAGGCGCG ACAGATGGTG GCAGAAGCGG TCGCCATATA TAATCAACGA CGGCCACATT TGGCCTTAAA ATATAAAACG CCCGATGAGG TTCATCAGGC GTTTTAG
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Protein sequence | MTSTIKRTQR DYSLAFKLAV VDQVEKGELT YKQAQDKYGI QGCSTVLVWL RKHGKLDWSQ GTPSTSMRGH LMTEPTTLTP EQKIKALEAE LEDTRMKAAF FEAIVEKLRT DYGISVVKKA TSETLQEKTA IGYRVTQCCR YLGISRQAYY QQCQRQKVSE QREQHVLQTV QYERLFQPRI GTRKLQYLLN KSHQIVIGRD RLFSSLRAHR LLVAPKRAYH KTTHSHHRFR CHPNLLKPSE QQVDITRSEQ VWVADITYLP LQNNEAYLSL VTDAWSRKIV GYHVDDNLKT DGVLTAYKQA LRQRQDKDKP LIHHSDRGIQ YCSNAYQAVH THHGVTCSMT DGYDCYQNAL AERVNGILKQ EFLTHKPATL QEARQMVAEA VAIYNQRRPH LALKYKTPDE VHQAF
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