| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2980 |
|---|
| Symbol | |
|---|
| ID | 7089048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3518310 |
|---|
| End bp | 3519608 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643461865 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002358889 |
|---|
| Protein GI | 217974138 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000022152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00348527 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT CTTATTCAGG GTACCGGTTG TTTACGCGCT TAGCCTTATA TCTACTGCTT
TGCGCGCTAA TAGGTTTATT GGTAGGGAAA CTGCTCTGGA TACTCTTTTT CGGCATGCTA
GGGCTGGTTT GCTGGCATTA CCGACAATTA TCACGGCTTA ACTTTTGGTT ATGGCGCGAT
AGAAAACTCA CGCCGCCGCA GGGCAGTGGG AGTTGGGAAG GGGTGTTTAA CGGCATTTAT
CGCCTCCAAG GTAAGAATCG TCGACGTGTC GGTCAATTGG CCGCATTGCT GGCGCGATTC
CGCCAAGGTG CAGAAGCGTT ACCCGATGCC GCTGTGGTGC TCGATTCAGA GCATAATATT
TTATGGTGCA ACAAGTTAGC GCAGCTTATT CTCGGCTTTG TTTGGCCGCA GGATAATGGC
CAGCGTATTG ATAACTTGAT CCGCCATCCT GATTTTTCCG CTTATATTAA ATCCGCACAA
TACAAAGAGC CGCTGGAGTT ACCATCGCCG GTATCGGATA GGCGTTTGCT TGAGATCCGT
ATCATGGCCT ACGGTGACAG GCAGCTACTG TTAATTGCGC GGGATATCAC CCGTATACGT
CAGCTCGAGG GCATGCGTAA AGAGTTTGTC GCGAATGTGT CACATGAGCT GAAAACGCCG
CTCACTGTGT TGCAGGGTTA TCTCGAAATG ATGCAAAGCA TGGCCGAGCC CGATTCGATG
AACGTCAAAC CGCTGGCCTT AATGCAGCAG CAGACGCGGC GAATGCAATC TATGGTCGAA
CAGCTATTGA TGTTATCGCG GATTGAAGAT GCGGCCGATA TCAACCTCGA ACATACAGTG
AACATGACGC AGTTGATGGA AGTGCTCAAG GAGGAAGCTA AAGCGCTGGC ACAAGATAGA
TACGAGCTGA GCTTCTATTG CGAACCTGGG CTTGATTCCC ACGGTAATGA ATTACAGCTA
AGAAGTGCTT GTTCAAACTT GATTTCTAAC GCGATTCGTT ACACTGAACC CGGCGGTAAA
ATCACAGTGC AGTGGCGCAG TATGGCAACG GGAGCCATTT TTAGCGTAAC GGATACGGGC
GAAGGCATTG CACCTCAGCA CATAGGTCGA TTAACTGAAC GTTTCTATCG GGTAGACAGT
GCGCGCTCAA GGCAAACCGG TGGCAGTGGT CTAGGTCTTG CGATAGTAAA GCATGCGCTT
AACCATCATC ACAGTGAGCT TAAAATCAGC AGTGAAGTGG GTAAAGGCAG TACGTTTAGC
TTTGTTATTC CTTTACATCT TATCGAGCGT AAGAAGTAA
|
|---|
| Protein sequence | MSDSYSGYRL FTRLALYLLL CALIGLLVGK LLWILFFGML GLVCWHYRQL SRLNFWLWRD
RKLTPPQGSG SWEGVFNGIY RLQGKNRRRV GQLAALLARF RQGAEALPDA AVVLDSEHNI
LWCNKLAQLI LGFVWPQDNG QRIDNLIRHP DFSAYIKSAQ YKEPLELPSP VSDRRLLEIR
IMAYGDRQLL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQSMAEPDSM
NVKPLALMQQ QTRRMQSMVE QLLMLSRIED AADINLEHTV NMTQLMEVLK EEAKALAQDR
YELSFYCEPG LDSHGNELQL RSACSNLISN AIRYTEPGGK ITVQWRSMAT GAIFSVTDTG
EGIAPQHIGR LTERFYRVDS ARSRQTGGSG LGLAIVKHAL NHHHSELKIS SEVGKGSTFS
FVIPLHLIER KK
|
|---|
| |