Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2959 |
Symbol | |
ID | 7089027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3489550 |
End bp | 3491835 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461844 |
Product | TonB-dependent receptor |
Protein accession | YP_002358868 |
Protein GI | 217974117 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.404716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATC TACACTTCAA ACTAAGTACA TTGGCAATTA GCCTAGCTGT TGCAGGTTTA TGCACAGGGG TTGTGGCTGC TGAAGCTCCT AATGTACAAG TTGCGAAAAC GCAAGAACCC AAAAAAGCGA AAGAATACAT AGAGCAAATC GTGGTTACTG GCACCGCCAG TGGTAAATCG ATGAAGAAAG TCGATGCGAG TTATGCCATC ACCACCATAG ATGCTGAATC CATAGAGAGA TTGGCACCTA AGAGTACGGC GGATCTATTT AAGGCGGTAC CCGGGGTCTG GGCAGAGAGT TCGGGTGGGG TTTCTGGGGC TAACGTTTTC GTGAGGGGCT TTCCCGGTGG TGGTGACGCA CCATTCCTGA CGGTACAACT GCAAGGTGTA CCCGTATATC AGCCGTCGAC CCTGTCATTT TTAGAAAACT CTTCCTTGTT TCGCATCGAT GAGACGGTGC AATTTATGGA TGCTCTGCGT GGTGGACCCA GTTCAGTCGT GTCAGCCGGC CAGCCAGGCT TAACGACCAA CTTTATTCTC AAGGAGGGCA GTGATGCCAC CGAAGGAAGG TTCAAGTACA GTACTTCTGA TTATGGTTTG CAGCGTGTGG ATGCCGTGGT GAGTGGAAGT CTGGCCGAAG ATTTGTATTT TATGGCTGGA GGTTATGCGC AGGAAAGTTC AGGGATAAGA GATGCTGGTT TCAATTCTGA AAAAGGCCAG CAGTTTACCG TCAACATCAC TAAGGTGCTG GATAACGGTA AGTTAAATCT GTTCACTCGG GTTACTGATG ACCATGGCGC TTGGTATCTG CCGACCCCTT TAGTGGCTGG CGTCGACAAT AGTTATACTC AGGTCGGTCC CTTGAACCGT CAGGCGACGA TTGAATTTGG ACCGAATGGT GAAAGCAAGG CGATCGATAT CAGCGATGGC CGCGGCTGGA AAGGCGCTAT TTCGGGGGGG AGCTTAGATT TAGATTTTGA TGGTGGCTGG AGTCTAGTCG ATCGTTTTGC CTACACTTCG GGTGATGCTA ATACCCTTGG GCTGGTACCC AATGGCTCGC CGGTGGCGTT ATCGACTGTG GCCGATAATG GTGTTAGCGC GATAGGGGCC GTGAGTCAAA AGACCTACGG CGGTGACACG CTAGTGCAAC AGTTGGGCCG TTGGGCGGTG CTTAAAAACA TTGAGGCTTT AACCAACGAT CTGGCTATGA CGAAAAAGTC CGATAGTTAT CAGGCAACTC TGGGACTCTA TCGTTCAGAT TATAGCGTCA AGGATTGGTG GAGCATAGGT AATCAGGCCT ATTATCTGGT GCAGGCGGGG GGGGAAGCCT TGACCGGTAT AGACTGCAAC GATAACAAGG ACAGCTGTGA CTGGAATTAC GATATTAGTG CCGTTGGTGA TGGTAAGACG AGTGCCTTTT ATGGTGCGTT CGAATATACG TTTAGCGACC AATGGAGCGC TGATATCGGT CTGCGCAACG AGAATCATCA AATTGACTAC ACGGTCGATG AGGGACTCGA TGGGGTGATC AACAAGTCGG TGGATTACGA CCAGACGGAT CTTTCCTGGA CCGCTGGGAT TAACTGGCAA TTTTCCGACA ATGCAGGGGT TTTCTTGCGT GCCAGTGAAG GTTCTAAGAT GCCTAGCTTC GATGATTTTA GGGATAACTA TGATGCCTAC ACTAAAGGTG AGAATCTGAT CAAGGATGTG ACTCAGTATG AACTGGGCTA TAAGTTGGCA TTGGATAACC TTAATCTGTA TGCCACAGGA TTCTTCAACG AAGTTAAAGG GGATACCTTC GTCAGAAAAC CCGGTGACCC GGCAGAAGTA CTGACCAACG AAGCCTATGG ACTGGAATTG GATGCGGCTT ACTTCAATGA TAGCGGTTTC TCAATTAACA TGAATGGTAC GTTGCAGAGC ACTGAGATTA CAGAAAGTCC TATTAATAAA GGTAATGAAG CACAGCGTCA GCCCAAGTGG CAAATCCGCC TGACACCGAG TTATGACTTC GAGGTGGCGG GACTGGACTC TACCTTGTAC GGCACTCTGT CAGCAGTGGG AGATCGCTAT GGTAACAACG AGAATACCGT AGTGCTCGAT GGTTATGAGA AGTTGGATAT TGGTCTGATA GTGCGTACCG ATGGCGGGCT TAAGTTTGAG TTGGGGATGC AAAATGTAAC CGACGAGGAT GCCTTAACCG AAGGCGATCC TCGCAGTGCG GATGCCGCAA ACGGCCGTTA TATCATGCCA AGAACCACAA CATTTAATGT CAGCTATGAT TTCTAA
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Protein sequence | MTNLHFKLST LAISLAVAGL CTGVVAAEAP NVQVAKTQEP KKAKEYIEQI VVTGTASGKS MKKVDASYAI TTIDAESIER LAPKSTADLF KAVPGVWAES SGGVSGANVF VRGFPGGGDA PFLTVQLQGV PVYQPSTLSF LENSSLFRID ETVQFMDALR GGPSSVVSAG QPGLTTNFIL KEGSDATEGR FKYSTSDYGL QRVDAVVSGS LAEDLYFMAG GYAQESSGIR DAGFNSEKGQ QFTVNITKVL DNGKLNLFTR VTDDHGAWYL PTPLVAGVDN SYTQVGPLNR QATIEFGPNG ESKAIDISDG RGWKGAISGG SLDLDFDGGW SLVDRFAYTS GDANTLGLVP NGSPVALSTV ADNGVSAIGA VSQKTYGGDT LVQQLGRWAV LKNIEALTND LAMTKKSDSY QATLGLYRSD YSVKDWWSIG NQAYYLVQAG GEALTGIDCN DNKDSCDWNY DISAVGDGKT SAFYGAFEYT FSDQWSADIG LRNENHQIDY TVDEGLDGVI NKSVDYDQTD LSWTAGINWQ FSDNAGVFLR ASEGSKMPSF DDFRDNYDAY TKGENLIKDV TQYELGYKLA LDNLNLYATG FFNEVKGDTF VRKPGDPAEV LTNEAYGLEL DAAYFNDSGF SINMNGTLQS TEITESPINK GNEAQRQPKW QIRLTPSYDF EVAGLDSTLY GTLSAVGDRY GNNENTVVLD GYEKLDIGLI VRTDGGLKFE LGMQNVTDED ALTEGDPRSA DAANGRYIMP RTTTFNVSYD F
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