Gene Sbal223_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2948 
Symbol 
ID7089016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3474908 
End bp3475750 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID643461833 
ProductROK family protein 
Protein accessionYP_002358857 
Protein GI217974106 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.319818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TATGTTTAGA TCTTGGGGGA ACTAAACTGA TGTTGGCACA GGTGGAAGGT 
AAAACCTTAC TCGACACTTG GCGGTATCCC GTTCCCGCCG ATGGCAATTT CGAACAGTTA
CTCGATTTCC TCGTGACCTG TATCCACAGC CACCTCACGC CTGAAACCTA TGGTATTTCC
ATCGGGATAC CCGGCATGGT GGATATGCAC AGCGGCACCT TACTCGAAGT GCTCAACATC
CCTGCGTTGA CGGCAACGCA GTTAGCCCAG CAACTTAAAA ATACCTTTGA AATGGATGTT
GTTGTGAATA ACGACGCTAA CCTCTTTGCC CTTGGCGAAG CTGTGCTCAA TCGCAATCAA
GACATGCTCG GGATTACCTT AGGCACAGGC GTGGGCGCTG GGGTGATTTT TAATGGTCAG
TTGTATTCGG GTAAACATTG CGCCGCAGGA GAAATCGGCA GTTTGAGTTA TCGCGATGGC
ATAATTGAGC ACTATTGCTC GGGGCAATAC TTCACCACTC ACCATCACAT GAGTGGCGAA
TATTTGTATC AAAAAGCCTG TGAAGGAGAC AGCCAAGCGC TGCAAGCCTT CGCCCATTTT
GGTGAACACT TAGCGCACAT GATCGCCCAA ACCTTACTGA TATACGATCC CAAAGATATC
GTCCTTGGCG GCTCAGTCAG CCAAAGCTTT CCCTTTTTTA TTGAAGCGCT TAAACAGAAA
TTGCAAAGCT TAGTCTATGG CCCCCAACTG GCGGACTTGA CGATTTCAGC CAGCCAACAT
CACAATGCGG CACTCATTGG CGCCGCGCAA TGGTTTTTAC AACAAAAGGA CTTAGCTAAG
TGA
 
Protein sequence
MSVLCLDLGG TKLMLAQVEG KTLLDTWRYP VPADGNFEQL LDFLVTCIHS HLTPETYGIS 
IGIPGMVDMH SGTLLEVLNI PALTATQLAQ QLKNTFEMDV VVNNDANLFA LGEAVLNRNQ
DMLGITLGTG VGAGVIFNGQ LYSGKHCAAG EIGSLSYRDG IIEHYCSGQY FTTHHHMSGE
YLYQKACEGD SQALQAFAHF GEHLAHMIAQ TLLIYDPKDI VLGGSVSQSF PFFIEALKQK
LQSLVYGPQL ADLTISASQH HNAALIGAAQ WFLQQKDLAK