Gene Sbal223_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2943 
Symbol 
ID7089011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3466408 
End bp3467535 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content48% 
IMG OID643461828 
Productpolysaccharide deacetylase 
Protein accessionYP_002358852 
Protein GI217974101 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.567771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AATCGATAGC CGCCGCAGTT GGACTTTGTT TAGCGAGCTT AAGTGTTGCC 
CACGCCAGCG ATAAAACCAT TTACCTCACC TTTGATGATG GTCCAATTGA TGCGACATTA
GGACTGTTAG ACGCCTTAAA AGACGCCAAT ATCAAGGCGA CGTTCTTTAT CAATGCTTTT
CATATGTATG GCGAAGGGGA TGAAAACGAA GCGTTAGCGG CTGTCGCCCT ACAACGTTTG
CTAGACGATG GTCATATTCT GGCAAACCAC AGTTACGATC ATATGCTGCA TAACTGCACC
GATGGTGTGC AATCGGGGGC GGTTTATTGC AATCAAGTGG GCCTCTGGCC AGTTAAATCC
TATCAAGATG CGGCTACCGA CTTTACCTAC TTTGTGACGA ATACAGCCAA AGTGGTTGAA
CTTATCCCTA ATGCCGCCAG TTATCCCAAC AACAAGATGA CTAAGTTGGC GCGTTTGCCT
TATACCAATG GTTGGCGAGT GAGCAGTAAA CTCAAAGGCG ACGGTTTGTG TGCCACCTCT
GATACTGTGC CGCCTTGGGA CCCCGCTTTT GCTTGTACCG CTGAAACTTC TACCAACAGT
TCGCAAGTTG CGGTGCAAAT TCAAAATATG CTTGCCGAGA GTGACTATAA GATATTTGGT
TGGGACTTTG ATTGGGGCCC TGAGGATTGG GGCGTGGCTT TTCCCGCTGA ATCTATGGCC
GATGGGATTC AGCTGGTGGA TAAAATCAAT CAAGTGATCA ACACCTGTGC GGGCACCACA
ATGAACCCTC TTAACAGTCG CACGCAGAAC TTAGACTGTA GCGATGGTTT GCACGACGGT
AAAGTGGTGA TCTTGACCCA CGACTTCCTG TTTGAGAATG CTCACCGTGG TCAGGGTGCG
ACCATCAACT TGCCTAAAAT TAAACGCTTT GTGGAAGAGG CGCAGCGCCA AGGATACCGT
TTCGACACGC TAGATAACTA TGCCCCCGCT TGGCAGGATC AGCATGATTA TCAGCAGCCT
GATTTTGTCT CGTATCAAGA TAAAATCTAT TCCTTAGTGC AAGCCCATTT CTCCCAAAGT
AATTGGCAAC CGAACCAAAC CCCAGCCTTG TGGAAAAACG AGAAGTAG
 
Protein sequence
MKLKSIAAAV GLCLASLSVA HASDKTIYLT FDDGPIDATL GLLDALKDAN IKATFFINAF 
HMYGEGDENE ALAAVALQRL LDDGHILANH SYDHMLHNCT DGVQSGAVYC NQVGLWPVKS
YQDAATDFTY FVTNTAKVVE LIPNAASYPN NKMTKLARLP YTNGWRVSSK LKGDGLCATS
DTVPPWDPAF ACTAETSTNS SQVAVQIQNM LAESDYKIFG WDFDWGPEDW GVAFPAESMA
DGIQLVDKIN QVINTCAGTT MNPLNSRTQN LDCSDGLHDG KVVILTHDFL FENAHRGQGA
TINLPKIKRF VEEAQRQGYR FDTLDNYAPA WQDQHDYQQP DFVSYQDKIY SLVQAHFSQS
NWQPNQTPAL WKNEK