| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2932 |
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| Symbol | |
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| ID | 7089000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3454430 |
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| End bp | 3456076 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643461817 |
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| Product | PfaD family protein |
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| Protein accession | YP_002358841 |
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| Protein GI | 217974090 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.266003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCC ATACTCTAGA TCAATTCAAT AGTAATAACG AAAAACTTAG CCCTTGGCCG
TGGCAAGTCA ACGATGCAGA GCTGAGCTTT GATATCGACT CATTAGGCAA AAAACTCAAA
GATTTAAGCC AAGCCTGCTA CTTAGTGAAT CACAGCGAAA AAGGCTTAGG CATAGCGCAA
ACGGCCGAAG TGACCACCAG TGACAGCCAA GCGCCATTGG GCTCACACCC TGTCAGCGCC
TTTGCCCCTG CCCTTGGCAC CCAAAGTTTA GGCGACAGTA ATTTTCGCCG CGTCCACGGT
GTCAAATACG CTTACTACGC CGGCGCTATG GCAAACGGTA TTGCCTCGGA AGAACTGGTT
ATCGCCCTTG GCCAAGCGGG TATTTTATGC TCATTTGGCG CGGCGGGGTT AATTCCATCG
CGTGTTGAAG CGGCCATTAC CCGCATTCAA GCGGCGCTGC CCAATGGCCC TTACGCTTTT
AACTTAATTC ACAGCCCAAG CGAGCCCGCA TTAGAGCGCG GTAGCGTTGA GCTGTTTTTA
AAACATAAAG TGCGCACGGT CGAAGCCTCG GCATTTTTAG GTTTAACGCC GCAGATCGTC
TATTACCGTG CAGCGGGGTT GAGCCGCGAC GAACATGGTG AGATAGTCAT TGGCAATAAA
GTCATAGCAA AAATCAGCCG CACCGAAGTC GCGACTAAGT TTATGGAGCC GGCGCCGGCC
AAAATTCTCC AGCAATTAGT GAGTGACGGT CTTATCAGCC AAGACCAAAT GGCGATGGCG
CAACTCGTGC CAATGGCGGA CGACATCACG GCCGAAGCCG ACTCAGGCGG CCATACCGAC
AATCGTCCAC TGGTCACGCT ATTGCCGACG ATTTTGGCGC TCAAAGATGA AATCCAAGCT
AAATATCAAT ATAAAACGCC CATCCGTGTG GGTGCAGGCG GCGGCGTCGG TACTCCCGAT
GCAGCACTTG CCACCTTCAA CATGGGCGCG GCCTTTATCG TCACAGGTTC TATCAACCAA
GCTTGCGTCG AAGCGGGCGC GAGCGAACAC ACCCGTAAGT TACTCGCCAC CACAGAAATG
GCCGATGTGA CTATGGCACC TGCCGCCGAT ATGTTCGAAA TGGGCGTGAA ATTACAAGTG
GTTAAGCGCG GCACCCTGTT CCCGATGCGC GCCAATAAGC TTTATGAGAT CTACACCCGT
TACGATTCGA TTGATGCTAT CCCTACGGAC GAGCGTAAAA AGCTCGAAGA GCAAGTGTTC
CGCTCATCAC TCGATGACAT TTGGGCGAGT ACTGTCGCCC ACTTTAACGA GCGCGATCCA
AAGCAAATCG AGCGCGCACT GGATAATCCC AAACGTAAGA TGGCGCTGAT TTTCCGCTGG
TATTTGGGTC TTTCGAGCCG CTGGTCAAAC ACAGGTGAAA TCGGCCGCGA AATGGATTAC
CAAATCTGGG CAGGCCCAGC ACTGGGTGCA TTTAACGCTT GGGCGAAAGG CAGTTATTTA
GATGACTATA AAGCCCGTAA TGCGGTGGAT TTAGCCAAAC ATTTAATGGT GGGCGCGGCG
TATCAATCCC GCATTAACTT GCTGTTATCT CAAGGTGCGA GCATTCCGGT CACACTACTA
CGCTGGAAAC CGCTGAATCG TTTTTAA
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| Protein sequence | MTSHTLDQFN SNNEKLSPWP WQVNDAELSF DIDSLGKKLK DLSQACYLVN HSEKGLGIAQ
TAEVTTSDSQ APLGSHPVSA FAPALGTQSL GDSNFRRVHG VKYAYYAGAM ANGIASEELV
IALGQAGILC SFGAAGLIPS RVEAAITRIQ AALPNGPYAF NLIHSPSEPA LERGSVELFL
KHKVRTVEAS AFLGLTPQIV YYRAAGLSRD EHGEIVIGNK VIAKISRTEV ATKFMEPAPA
KILQQLVSDG LISQDQMAMA QLVPMADDIT AEADSGGHTD NRPLVTLLPT ILALKDEIQA
KYQYKTPIRV GAGGGVGTPD AALATFNMGA AFIVTGSINQ ACVEAGASEH TRKLLATTEM
ADVTMAPAAD MFEMGVKLQV VKRGTLFPMR ANKLYEIYTR YDSIDAIPTD ERKKLEEQVF
RSSLDDIWAS TVAHFNERDP KQIERALDNP KRKMALIFRW YLGLSSRWSN TGEIGREMDY
QIWAGPALGA FNAWAKGSYL DDYKARNAVD LAKHLMVGAA YQSRINLLLS QGASIPVTLL
RWKPLNRF
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