| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2925 |
|---|
| Symbol | |
|---|
| ID | 7089494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3432691 |
|---|
| End bp | 3434679 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461810 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002358834 |
|---|
| Protein GI | 217974083 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT CTTTGATGAC ATTGAGTATT ATCGCAACGT TCTCCCTCAG CGCTTCGGCG
GCAGAACACG AGCATGAACA TATCAGTCTG CACTATCAGG GAAAGCCTGC GACCCAGCAA
ACCGCTGAGG TCAACAAGGC CACAGCAGCC ACTCTAAATT ACACCGATAA AAAAGCCTTT
GAAGAGTTTT CTAAGAATCT CATCGCCGAA CTCGATGAAC CAACTGCCGC CATTTTACGC
ACAGAATTCA GCTTTATCGG CGACAAAACC CCAGACACAG TCAACCCATC ACTCTATCGC
CAAGCCCAGT TGAATATGGT GTCTAACGGC TTATACAAGG TCACAGATGG TATTTATCAA
GTTCGCGGCA CTGACTTGTC GAACTTAACC CTTATCCGCG GTAAAACGGG GTGGATCCTT
TATGACGTGC TGCTCACCAA AGAAGCGGCA AAGTTATCAT TGGAGTTTGC GCTAAAAAAC
TTGCCTGAGG GTAATGACTT ACCTGTGGTG GCGATGATTT ATTCCCACAG TCATGCGGAC
CATTTTGGCG GTTCCCGTGC AATCAAAGAC ATGTACCCTA AGGTCAAAGT CTATGGTTCA
AATAACATTA CCAAAGAAAT TGTCGACGAA AACGTTCTCG CCGGTAATGC CATGAGCCGC
CGCGCTGCCT ATCAATACGG CGCAACGTTA GAGCGAAACG ATCAAGGTAT TGTCGATGCA
GCACTCGCCA AGGGGTTATC CAAAGGCGAA GTGACCTACG TTAAACCCGA TGTCACCTTA
AACGGCAAAG ATAAGTGGGA AACACTCACC ATTGATGGCA TAGACATGGT GTTTATGGAT
GCCTCAGGCA CAGAAGCCGC CTCGGAAATG GCCACCTATA TTCCCTCAAT GAAAGCCCTG
TGGACGGGTG AACTCACCTA CCATGGCATG CACAACATTT ACACCTTACG CGGTGCAAAA
GTCCGTGACG CCATCAAATG GTCAAAGGAT ATCAATGCAT TGCTGACACG CTTTGGCGAT
GATGCGCAGG TACTTTTTGA GGCCCACTCG GCGCCCGTCT TTGGCAATGC GGATGTGAAT
GCTTATCTCA GAATGCAAAG AGATAACTAT GGCTTAGTAC ACAATCAAAC TCTGCGTTTA
GCCAATAATG GCGTGGGTAT TCAAGATATT GGCGATGCGA TTCAAACCAC CATTCCTAAA
GCCGTGCGCG ATACTTGGTA TACCAATGGT TACCATGGTA CCTACAGCCA TAATGCCAAA
GCCGTGTACA ACATGTATTT AGGCTATTTC GATATGAATC CAGCCAACTT AAACCCGCTA
CCGACTAAGG ATGAAGCGAA GAAATTTGTC GAGTATATGG GTGGTGCTAA AGCTGTGGTT
AAACATGCCA AAGCCGACTA TGCCCAAGGT GAATACCGTT TCGTGGCGAC GGCACTGAAT
AAAGTGATCA TGGCAGAACC CGATAACGAA AAGGCCAGAC AATTACTTGC CGATACCTAT
GAGCAACTGG GCTACCAAGC CGAAGGCGCA GGCTGGCGTA ACATTTATCT TACCGGCGCC
CAAGAGTTAC GCGTAGGGAT CCAACCCGGC GCTCCCAAAT CGGCATCGGC AGATATTTTA
GGTGAAATGG AGATCTCGAC TCTGTTTGAC TTCCTCGCCG TAAAAGTCGA TAGCATCAAG
GCCGCTGAAC TTGGACTGAT CAGGCTTAAT GTGATTAACC CCGATACCAA AGACACACTC
TACGTCGAGC TAAGCAACGG TAACTTAAGC AATATTAAGG TTGAGAAACC AATGGAGGCC
GACACCAATC TTTATATTGA TAAGCGCTAT ATTACCGGGA TTTTACTCGG CAAAGTGACC
CTCAAAGACT TACTTGCCAA CGGCACGGCC AAACTCGAGG GTGATAAAGC GGCCTTCAGT
AAGATAGCGT CGACCTTAGT AAAATTTGAT GAAAACTTTG AAATCGTCCC TCTACCTAGC
GCGAAATAA
|
|---|
| Protein sequence | MQKSLMTLSI IATFSLSASA AEHEHEHISL HYQGKPATQQ TAEVNKATAA TLNYTDKKAF
EEFSKNLIAE LDEPTAAILR TEFSFIGDKT PDTVNPSLYR QAQLNMVSNG LYKVTDGIYQ
VRGTDLSNLT LIRGKTGWIL YDVLLTKEAA KLSLEFALKN LPEGNDLPVV AMIYSHSHAD
HFGGSRAIKD MYPKVKVYGS NNITKEIVDE NVLAGNAMSR RAAYQYGATL ERNDQGIVDA
ALAKGLSKGE VTYVKPDVTL NGKDKWETLT IDGIDMVFMD ASGTEAASEM ATYIPSMKAL
WTGELTYHGM HNIYTLRGAK VRDAIKWSKD INALLTRFGD DAQVLFEAHS APVFGNADVN
AYLRMQRDNY GLVHNQTLRL ANNGVGIQDI GDAIQTTIPK AVRDTWYTNG YHGTYSHNAK
AVYNMYLGYF DMNPANLNPL PTKDEAKKFV EYMGGAKAVV KHAKADYAQG EYRFVATALN
KVIMAEPDNE KARQLLADTY EQLGYQAEGA GWRNIYLTGA QELRVGIQPG APKSASADIL
GEMEISTLFD FLAVKVDSIK AAELGLIRLN VINPDTKDTL YVELSNGNLS NIKVEKPMEA
DTNLYIDKRY ITGILLGKVT LKDLLANGTA KLEGDKAAFS KIASTLVKFD ENFEIVPLPS
AK
|
|---|
| |