| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2924 |
|---|
| Symbol | |
|---|
| ID | 7089493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3431626 |
|---|
| End bp | 3432567 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643461809 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002358833 |
|---|
| Protein GI | 217974082 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAC AAAAGCCGTT AGATTTAAAC TTATTGCGGG TGTTTATGGT TGTTTACCGT
ACTCGTTCAT TCACGCAAGC GGCTGAAGAG TTGGACTTAA CTCAGTCTTC AGTCAGTAAC
GCGATCAGTC GATTCAGGGT ATGGGTCGGG GAGTCACTGT TCAATCGGGT TGGGAGGGGA
ATTGAACCGA CGGCGGTGGC GCGGGAAATG TACCGTAAGT TTGAGCAGCC AATGGCAGAT
ATCGAAACTG TATTGCTGGG GTTTGAGCAT TTTGATCCAA AGTGCAGTCA GCGACGCTTC
TATGTATATG CCAATGAGTC GGTTATCGAA GCGCTGCAAA CCGGTGTGCA GGCGTTATTA
CAGGATGCGG ATATTGAAGT GATTTTCCGG GAATCACCGC CACAGGAAGC TGATTTATAT
CGCGATATCT TGCTTGAGCG AGTCGCTGTG GCGATAGACA TTAAACCCGC GCAGCAAAGT
TTGCTCTCGA GCAAATTACT CTTCACCGAA ACCTTAGTGT GTATCGTCAG TCGGCAGCAT
CCTCGGATTC AAGGCGCCAT TACCCATGGG CAGTATTTTG AGGAGAAACA CGTCTTTTTG
AATATGCGGC GTTTTAATCT TACTGCGGGG GATTTGTTTA CCGAAGGCGT CTTGCCTAGA
CGCAAGATGT ATAGTGAGCA GTCATCTTTA TTGAGTATGT TTGCTACCGT AGGCAAAAGT
GAGGCGATAG GCATAGCGCC TTTGCGGTAC GCCAGTCAGT ACGCCGAGTT GTTCGGCATC
CAGATTTTAC CTATGCCACT GAAAACAAGA CCCATTGATT TGTATATGGT GTGGAGCAGT
AAATACACCC AAAACCCGAG CCATCAATGG CTGCGAAGCT TATTGCTCGA TGCCAGTGCG
AGCACTGTAA ATGAAAAAGC TCTGAATCTT GCTAGCAGCT AG
|
|---|
| Protein sequence | MPTQKPLDLN LLRVFMVVYR TRSFTQAAEE LDLTQSSVSN AISRFRVWVG ESLFNRVGRG
IEPTAVAREM YRKFEQPMAD IETVLLGFEH FDPKCSQRRF YVYANESVIE ALQTGVQALL
QDADIEVIFR ESPPQEADLY RDILLERVAV AIDIKPAQQS LLSSKLLFTE TLVCIVSRQH
PRIQGAITHG QYFEEKHVFL NMRRFNLTAG DLFTEGVLPR RKMYSEQSSL LSMFATVGKS
EAIGIAPLRY ASQYAELFGI QILPMPLKTR PIDLYMVWSS KYTQNPSHQW LRSLLLDASA
STVNEKALNL ASS
|
|---|
| |