| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2896 |
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| Symbol | |
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| ID | 7089465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3405936 |
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| End bp | 3407126 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461781 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002358805 |
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| Protein GI | 217974054 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0236314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.271291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA TGGTGATTTT GGGTGCTACT GGCTCTATAG GTGCCAGTAC CTTAAGTGTG
ATCTCGGCTA ATCCACTCGC ATATAGCGTG TATGGATTAG TGGCCAACGC GAGTGTTGAT
AAGATGCTTG CACTCTGTGT GGCCCATAAA CCGAAAGTGG CGCATATGGT GGATGAAGCG
GCAGCAAAAC AGTTGCGTGC CGTTTTACCT GCGACGCTCA ATATCCAAGT CACCACAGGC
ATGAACGATT TACTCGGGTT AGTGACCGCT GCCGAAGTGG ATACCGTGAT GGCTGCGATT
GTAGGGGCTG CAGGGCTAGT ACCTACGCTT GAAGCCGTAA AGGCGGGTAA GCGGGTATTA
CTGGCCAACA AAGAAGCCTT AGTCATGTCA GGTGAGCTGT TTATTGAGGC GACTAAGCGC
TCTGGCGCAG TGCTCTTGCC TGTGGACAGT GAGCATAATG CCATCTTCCA ATGTCTCCCC
CAGGAAGTGC AAGCCAACCT TGGCCGTTGT GACTTAGCGG CGTCGGGTAT TTCCCATATT
CTGTTAACCG GTTCTGGCGG ACCTTTCCTA CGGTCGGATC TTGCGACACT GGCCGCCATG
ACGCCAGCCC AAGCCTGTAA ACATCCTAAT TGGTCTATGG GGCCTAAAAT CTCCGTCGAC
TCCGCCACTA TGATGAATAA GGGCTTAGAG TTTATTGAGG CGCGTTGGTT GTTTAACACT
CAGGCTGAGC AACTGAAGGT GGTTATCCAT CCGCAAAGCG TGATCCACTC TATGGTGCAG
TACCGTGATG GCTCAGTTAT TGCCCAAATG GGTAACCCAG ATATGCGTAC GCCTATTGCC
CATTGCATGG CTTATCCGCA AAGAATTCAT TCTGGCGTTG AACCTTTAGA TTTTTTCAAA
GTCGGACAGT TAAGCTTTTA TGAACCTGAT TTTGAACGTT TCCCCTGTTT GGCTCTGGCA
ATGGACGCGT GTGCCCAGGG CCAAGAGGCG ACAACTGTGT TAAATGCAGC CAATGAGATT
GCTGTTGAAG CGTTTTTACA GGGACAAATT GGCTTTACTC AAATTGCAAA AGTGAACGAA
GCTTGTTTAG TGACAGTGCC TAAGCGTCCT ATGGGCAGCA TAGAAGATAT TTTAGCCTTA
GATGCGCAAA CCCGCGTCTA TGCGCGTGAG ACCTTAGCAA GCATCGCTTA G
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| Protein sequence | MQNMVILGAT GSIGASTLSV ISANPLAYSV YGLVANASVD KMLALCVAHK PKVAHMVDEA
AAKQLRAVLP ATLNIQVTTG MNDLLGLVTA AEVDTVMAAI VGAAGLVPTL EAVKAGKRVL
LANKEALVMS GELFIEATKR SGAVLLPVDS EHNAIFQCLP QEVQANLGRC DLAASGISHI
LLTGSGGPFL RSDLATLAAM TPAQACKHPN WSMGPKISVD SATMMNKGLE FIEARWLFNT
QAEQLKVVIH PQSVIHSMVQ YRDGSVIAQM GNPDMRTPIA HCMAYPQRIH SGVEPLDFFK
VGQLSFYEPD FERFPCLALA MDACAQGQEA TTVLNAANEI AVEAFLQGQI GFTQIAKVNE
ACLVTVPKRP MGSIEDILAL DAQTRVYARE TLASIA
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