| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2887 |
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| Symbol | dnaE |
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| ID | 7089456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3393537 |
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| End bp | 3397010 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461772 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_002358796 |
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| Protein GI | 217974045 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0886013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CTCGTTTTGT GCATCTTCGT GTCCACAGTG ACTTCTCAAT GACCGATGGC
GTGGCCAAGG TCAAGCCGAT TTTGGCGCAG GTGGAAGCGC AGGGAATGGC GGCTGTCGCC
CTGACTGACC AAAACAACTT TTGTGGTTTG GTTAAGTTTT ACAGTGGTTG CCATGGTGCG
GGGATCAAAC CGATTATCGG CGCCGATTTT TGGATGCAAG TGCCAGGATT CGAAGGCGAA
TTATGCGCCT TGACCATAAT TGCGATGAAC AATATCGGTT ATCAGAATCT AACCCAAATT
ATCAGTCAGG CCTATTTACG TGGCCAAGTG GCTGGGCGTG TGGTGATCGA CCAAGAGTGG
TTACTCACTT ATAACGAAGG TATTTTGCTG TTATCAGGCG CCAAAGAGGG CGATCTGGGT
AAGGCGCTCC TCAAGGGTAA TAGCACTCAG GTTGAATCTT TATGTGAGTT TTATCAGACA
CATTTCGCCG ATCGATATTT TCTCGAACTT ATCCGTACCG GTCGCCCCGA CGAAGAGCGC
TATCTGCACA TGGCTGTGAT CTTAGCGCAG GATAAGGGTA TCCCAGTGGT CGCCACTAAT
CAGGTAGTGT TCCTTAAACC TGAGGATTTC GACGCCCATG AAATTCGGGT GGCGATCCAC
GATGGTTTTA CCCTTGCCGA TCCGCGCCGT CCTAAAAAGT ACAGTGAACA GCAGTATTTA
CGTAGCGAAG AGGAAATGTG TGAGCTATTT GCCGACATTC CCGCGGCGCT GGCGAACAGT
GTCGAAATCG CTAAACGTTG TAACGTCACG ATTCGTTTGT ACGAGTATTT CCTGCCCAAC
TTCCCGACGG GCGATATGTC CATCGAAGAC TTTCTGGTTG ATTGTTCGAG GAAGGGCCTT
GAAGAGCGGC TCGAGTTTTT GTTCCCGAAC CCTGAAGTGC GTGCCGAGAA ACGGGGCGAA
TACGACGAAC GGCTCGATAT CGAACTCAAA GTAATCAATC AGATGGGCTT TCCCGGTTAC
TTCTTGATCG TAATGGAGTT CATTCAATGG GGTAAAGATA ACGGTATCCC AGTGGGACCC
GGTCGTGGTT CGGGCGCGGG TTCACTTGTG GCCTATGCGC TCAAAATCAC CGACTTAGAC
CCGCTCGAAT TTGACTTACT GTTCGAACGT TTCTTGAACC CTGAGCGGGT TTCTATGCCC
GACTTTGACG TCGATTTTTG CATGGATAGA CGCGATGAAG TGATCGACCA CGTGGCCGAG
TTGTACGGCC GCGAAGCGGT ATCGCAAATT ATCACCTTTG GTACTATGGC GGCAAAAGCG
GTTATCCGCG ACGTTGGCCG AGTGCTCGGT CATCCCTATG GTTTCGTTGA CCGAATTTCA
AAGTTAATTC CCCCTGAGCC TGGCATGACA CTGGCGAAAG CCTTTGAAGT CGAGCCAGCG
TTGCAAGAAT CCTATGATGC CGATGAAGAC GTCAAAGATC TGATCGACAT GTGCCGTAAG
CTCGAGGGCG TAACCCGTAA CGCCGGTAAG CACGCCGGTG GTGTAGTGAT TGCTCCGACA
AAAATTACCG ATTTTGCACC GCTCTATTGC GATGCAGAAG GCAAAAACCC AGTAACACAA
TTCGATAAAA ACGACGTTGA AACCGCAGGG CTGGTTAAGT TCGACTTCTT GGGATTAAGA
ACCCTGACGA TTATCGACTG GGCGCTCGAG ATGGTGAATA AGGTCGAAGT GAGAAACGGG
CGCAAACCAA TACGGATTGA GGCGATTTCA CTCACAGATC CCGCCTGTTT CCGTTTGCTG
CAAAAGTACG AAACCACGGC TGTATTCCAG CTCGAATCCC GTGGTATGAA GGATTTGATT
AAGCGTCTGC AGCCCGACTG TTTCGAAGAC ATGATCGCAC TGGTAGCACT ATTCCGTCCG
GGGCCGTTGC AATCGGGCAT GGTAGATAAC TTTATCGAAC GTAAGCATGG GCGCGAGGAA
GTCTCGTACC CCGATTCTCA GTATCAACAT GAATCGCTTC GTGAGCTGTT ATCGCCGACC
TACGGTATTA TTCTGTATCA AGAGCAGGTG ATGCAGATTG CGCAGGTGCT GTCGGGCTAC
ACCCTTGGCG GCGCCGACAT GCTGCGCCGT GCTATGGGTA AGAAAAAGCC CGAAGAGATG
GCCAAGCAGC GCAGTATCTT TAAAGAAGGC GCAATCAATA ACGGCGTCGA TGGCGACTTG
TCGATGAAGA TCTTCGACTT AGTGGAAAAG TTTGCCGGCT ACGGTTTTAA CAAATCCCAC
TCCGCCGCTT ATGCGCTGGT TTCCTATCAG ACCTTATGGC TTAAAACCCA TTTTCCTGCG
CAGTTTATGG CGGCGGTAAT GTCGGCCGAT ATGGATAACA CAGATAAAAT TGTGACCTTG
GTCGATGAAT GTGAGCGTAT GGGCTTGCCG CTTATTCCGC CGGATGTGAA CAAAGGTTTG
TTCAAATTTA CCGTCGATGA TGATCTGCGC ATTGTTTATG GCATCGGTGC CATTAAAGGC
GTGGGCGAAG GCCCAGTTGA ATCGATTTTA GAGGCGCGTA AAGACGGCCC CTTTGTCGAT
TTATTCGATT TCTGTGCCCG CATCGATTTG AAAAAACTCA ATAAACGCGT GATTGAAAAG
CTGATCTGCG CGGGTGCCTT AGACAACCTT GGGCCGCACC GTGCGTCAAT GATGGCCACC
TTGCCCGAAG CGATTCGCGC CGCCGATCAA CATGCTAAAG CTGAAGCGAT TGGCCAACAC
GATATGTTTG GTTTGCTCAA CAGTGAACCC GAAGACAGCA AGCAGCAGTT TGTTGAATGT
ACTCCTTGGC CGGATAAAAT TTGGCTTGAA GGTGAGCGCG AAACATTAGG CTTGTATTTG
ACCGGTCATC CGATCAATCA ATATTTAAAA GAGCTTAAGC ATTACACGTC CGGGCGTTTG
AAAGATGTGC ATCCCACCGA GCGCGGTAAA ATAGCCAAGG CTGCGGGTTT AGTGGTGGCA
ACACGCGTGA TGTTGACCAA GCGCGGCTCG AAAATGGGTC TGTTAACGCT TGACGATAAG
AGCGCGCGGC TTGAGATCAT GTTGTTTACC GAAGCCTTTG AAAAATTTAA TCATCTGCTG
GAAAAAGATC GCATCCTCAT TTGTGAAGGT GAGGTGAGTT ACGATGATTT CGCCGGCGGC
AACCGCATGA CGGCGCGTAA CATTATCGAC ATCAGTGAGG CGCGAAGTCA CTTTGCTAAG
GCGTTAGAAA TCGATATGGA TGGCAGTGAG TTAACGCCAT CAGCCCTTGA TACCTTCGAG
CAAGCCCTAA GCCCGTGGCG TAACGGCGCC GTGCCTGTGG TGATCAACTA CACTCAAGCC
CAAGCCAAAG GTCAATTTAG ACTCGCCGAT GCTTGGCGAG TGAATCCGAC CGATGACTTG
ATGCTCTCGC TTGAATCGCT GCTCGGGCCA AACAAGGTGA GAATTTTATT CTAA
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| Protein sequence | MSDPRFVHLR VHSDFSMTDG VAKVKPILAQ VEAQGMAAVA LTDQNNFCGL VKFYSGCHGA
GIKPIIGADF WMQVPGFEGE LCALTIIAMN NIGYQNLTQI ISQAYLRGQV AGRVVIDQEW
LLTYNEGILL LSGAKEGDLG KALLKGNSTQ VESLCEFYQT HFADRYFLEL IRTGRPDEER
YLHMAVILAQ DKGIPVVATN QVVFLKPEDF DAHEIRVAIH DGFTLADPRR PKKYSEQQYL
RSEEEMCELF ADIPAALANS VEIAKRCNVT IRLYEYFLPN FPTGDMSIED FLVDCSRKGL
EERLEFLFPN PEVRAEKRGE YDERLDIELK VINQMGFPGY FLIVMEFIQW GKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE
LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA
LQESYDADED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DAEGKNPVTQ
FDKNDVETAG LVKFDFLGLR TLTIIDWALE MVNKVEVRNG RKPIRIEAIS LTDPACFRLL
QKYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE
VSYPDSQYQH ESLRELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRSIFKEG AINNGVDGDL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHFPA
QFMAAVMSAD MDNTDKIVTL VDECERMGLP LIPPDVNKGL FKFTVDDDLR IVYGIGAIKG
VGEGPVESIL EARKDGPFVD LFDFCARIDL KKLNKRVIEK LICAGALDNL GPHRASMMAT
LPEAIRAADQ HAKAEAIGQH DMFGLLNSEP EDSKQQFVEC TPWPDKIWLE GERETLGLYL
TGHPINQYLK ELKHYTSGRL KDVHPTERGK IAKAAGLVVA TRVMLTKRGS KMGLLTLDDK
SARLEIMLFT EAFEKFNHLL EKDRILICEG EVSYDDFAGG NRMTARNIID ISEARSHFAK
ALEIDMDGSE LTPSALDTFE QALSPWRNGA VPVVINYTQA QAKGQFRLAD AWRVNPTDDL
MLSLESLLGP NKVRILF
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