| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2882 |
|---|
| Symbol | |
|---|
| ID | 7089451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3385987 |
|---|
| End bp | 3387840 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461767 |
|---|
| Product | protein of unknown function DUF885 |
|---|
| Protein accession | YP_002358791 |
|---|
| Protein GI | 217974040 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.92896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00786723 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACAG TACTAAAACG GATTGGACTC GGCAGCTTAG TCTTAGTGCT GTTATTAGTG
GCGCTGGCCG CCCATGAATG GTTTGCGAAA AAACCGTTTT TCTTTCGCGC GTTCTTAGAT
CGAAGTGTGG TCAAGATGGC TTTCGAAAGC CCTGAAACCT TGACCTCATT GGGCTTCTTA
GAATCGGTAG GGATTACAGG CCATAACGCC GAGTTGGATG ATGATAGTCC AGAGGCGATG
GATAAGACTT TCGCGCAAGT GCGAGATCTG CGTGAAACCT TATTGAGCTA TTCCGATGCG
GATTTAGATG AAAATCAGCG TATCTCCAAG GATATTGCCT TATATCTTGC CGATTTCGCA
TTGGTCTCAG AGCCGTATCG TTACCATAAC TATCCGCTGA ATCAGTTGTT TGGTGTGCAA
AACGGTTATC CCAGCTTTAT GCAGGCACAG CACCAAGTCC ATTCTGTGGG CGATGCTGAA
AACTATCTGT CGCGTTTACA AAAGGTGAAA CTTAAGTTTA CGCAAACTCT CGAAGGCTTA
AAAATCCGTG AAGCTAAAGG GATTATTCCG CCTAAGTTCG TGATTGATCG GGTGCTCACC
GAGATGAATG ATTTTGTCGC GACGCCGATC CAAGACAATA TTCTATACAG TTCCTTCAAA
ACCAAATTAG CTGACACGGA TATCAGTGCC GATGAGCAAG CACGGTTATT GGCTGCGGCT
GAAGCGGACA TTAAAGGTTA CGTGCATCCA GCATATCAAT TATTTATTGA CTACTTTACC
CAGTTACAAG CCAAAGCAGG GACGGATGAT GGTTACTGGG CGTTGCCTAA TGGCGACCTT
GCCTATGAGC AATTGCTGAA GTTCTTTACG ACCACTAATT ACACTGCTGA CGAAATCCAT
GCCAAAGGGC TGGCTGAGGT GGATCGCATT CAGAGCGAGA TCATGACTAT CTTAGCCGCT
GAAGGCTACG ATGTGAGCCA AGGTTTCTCG GTCGCGATTG AAGCATTAGC CGCCGATCCT
AAGTTTTACT ACGAAGATAG CGATGCGGGC AGAGCGCAAA TTCTGGTTGA TTATCAGCAT
ATTCTCGATG AAGTGAATGC GGGACTCGGT GATGCCTTCC GTATTCGACC CGAAGCGGGC
ATGGAAGTGG TGCGTATTCC TGAATTTAAA GAGAAAACAG CACCGGGTGC CTATTATCAG
CAGCCCGCGA TTGACGGCAG TCGTCCGGGG CGTTTCTATG CCAATTTATA TGACATCAAG
GCCACGCCTA AATACGGTAT GCGCACTTTA GCCTATCGCG AGGGGATCCC TGGGCATCAT
TTCCAAATTG CGGTGGCGAT GGAGTTAGAA GGTATGCCAC TTATTCGTAA GATGGCGCCT
TTTACGGCGT ACATTGAAGG TTGGGCTTTA TATAGCGAAC GTTTGGCGTG GGAACTTGGT
TTTCAAAAGG ATCCCTTTGA TAATATCGGT CGTTTGCAGG CAGAGTTGTT CCGCGCTGTG
CGTCTAGTGG TAGATACGGG CATTCACCAT AGCCGTTGGA CTCGCGAGCA AGCGATCGAC
TATATGAAGA AAAATACTGG CATGTCCGAT CGTGATGTCA CGGCAGAGAT TGAGCGTTAT
ATCGTTATGC CAGGCCAAGC GACGGCTTAT AAAGTCGGTA TGATGAAAAT TCTCGAACTG
CGTGAAAAAG CCAAGTCGGC CCTAGGGAAT AAGTTCGATC TCAGAGACTT CCATGATGTG
GTGCTGAAAA ATGGCGCCGT GCCCTTGGAT ATCTTAGAAA CATTGGTCGA TCGCTACATT
GCTGATAAAA ACAATGCTGA TACAAAAAGT GCTGAGGCTA AAGCAAAAGG CTAA
|
|---|
| Protein sequence | MKTVLKRIGL GSLVLVLLLV ALAAHEWFAK KPFFFRAFLD RSVVKMAFES PETLTSLGFL
ESVGITGHNA ELDDDSPEAM DKTFAQVRDL RETLLSYSDA DLDENQRISK DIALYLADFA
LVSEPYRYHN YPLNQLFGVQ NGYPSFMQAQ HQVHSVGDAE NYLSRLQKVK LKFTQTLEGL
KIREAKGIIP PKFVIDRVLT EMNDFVATPI QDNILYSSFK TKLADTDISA DEQARLLAAA
EADIKGYVHP AYQLFIDYFT QLQAKAGTDD GYWALPNGDL AYEQLLKFFT TTNYTADEIH
AKGLAEVDRI QSEIMTILAA EGYDVSQGFS VAIEALAADP KFYYEDSDAG RAQILVDYQH
ILDEVNAGLG DAFRIRPEAG MEVVRIPEFK EKTAPGAYYQ QPAIDGSRPG RFYANLYDIK
ATPKYGMRTL AYREGIPGHH FQIAVAMELE GMPLIRKMAP FTAYIEGWAL YSERLAWELG
FQKDPFDNIG RLQAELFRAV RLVVDTGIHH SRWTREQAID YMKKNTGMSD RDVTAEIERY
IVMPGQATAY KVGMMKILEL REKAKSALGN KFDLRDFHDV VLKNGAVPLD ILETLVDRYI
ADKNNADTKS AEAKAKG
|
|---|
| |