Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2880 |
Symbol | |
ID | 7089449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3381619 |
End bp | 3382383 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461765 |
Product | putative hydrolase |
Protein accession | YP_002358789 |
Protein GI | 217974038 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00014614 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGTACC AAGTCGACAC TCATACCCAT ACTGTGGCTT CAAGCCATGC TTATAGCACG ATTCATGACT ATATTGCCGT AGCAAAACAG AAGGGTATTC GCCTATTTGC GAATACAGAT CATGGGCCTG CGATGGCGGA TGCACCGCAT TTTTGGCACT TTGTGAATTT AAGAGTGCTG CCACGTATGG TCGATGGTGT CGGGATTTTG CGCGGTATCG AAGCCAACAT AAAAAATATC GACGGCGAGA TTGATTTCTT TGGCGATTAT CTAAAGCAGC TGGATATTGT GCTCGCGGGA TTCCATGAGC CGGTTTATCC GCCATCGGAT AAGGCAACCC ACACAGAGGC TATGATTAAT GCGATTAAGA GTGGCAAGGT TGATATCATT ACTCATCCGG GAAACCCAGC CTACCCGATT GATATTGAAG CCGTTGCCCG CGCCGCTGCC GAATACGGTG TAGCGCTTGA AATTAACAAT TCCTCCTTTG AAGTATCCCG TAAGGGTAGC GAAGCCAATT GCACTGCGAT TGCTAAAGCG GCCAAGGAAT TTGGCACTAT TTTAGTTATG GGCTCTGATT CCCATGTGGC CTTTAGTTTG GGCGGTTTTG CGCGGGCGCA AGCGATCATC GATGAAGTGG CTTATCCGCC ATCACGATTA CTCAATCGCA GTCCTTCTGC ACTCTTGGCT TTTTTAGCCG CCCGTGGTCA TGAAACCGTC GCCGATTTGA TCCCCTTATT TAGCGATGAT GAGCCATGCT GTTGA
|
Protein sequence | MQYQVDTHTH TVASSHAYST IHDYIAVAKQ KGIRLFANTD HGPAMADAPH FWHFVNLRVL PRMVDGVGIL RGIEANIKNI DGEIDFFGDY LKQLDIVLAG FHEPVYPPSD KATHTEAMIN AIKSGKVDII THPGNPAYPI DIEAVARAAA EYGVALEINN SSFEVSRKGS EANCTAIAKA AKEFGTILVM GSDSHVAFSL GGFARAQAII DEVAYPPSRL LNRSPSALLA FLAARGHETV ADLIPLFSDD EPCC
|
| |