| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2861 |
|---|
| Symbol | |
|---|
| ID | 7089430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3361479 |
|---|
| End bp | 3362123 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643461746 |
|---|
| Product | outer membrane protein W |
|---|
| Protein accession | YP_002358770 |
|---|
| Protein GI | 217974019 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00340553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000012731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA ATACTGTTTC TACACTGATC GCTGCCACCC TTTTAGCTGC TGGTTTTTCT
GCTTCTGTAT CGGCTCACCA AGCAGGTGAC ATTATCGTTC GTGCGGGTGC TGTTGTTGTT
GCGCCAAACG AATCAAGCGA CCCAGTTGCA ACTTTTGGTG AGTTCAAAGT GAGTAACAAT
ACTCAACTTG GTTTGAACTT CGGTTATATG TTGACTGATA ACTTTGGGGT AGAGTTATTA
GCAGCAACGC CTTTTAGCCA CGATGTTTCT TTGGCTGGCG TAGGTAAAAT TGCTGAAACT
AAGCAACTGC CGCCAACTTT AGTGGCGCAG TACTATTTCG GTAATTCTCA ATCAGTGGTT
CGCCCTTACA TTGGCGTCGG TGTGAATTAC ACTAACTTTT ATGATAATGA ATTCACCAAT
GATTTAGGTG GTGCGTTAAC TGACTTAAGC ATGACCACGT CTTGGGGCTT AGCGGCACAA
GCGGGTGTTG ACTATCAGGT TAACAAAAAC TGGTTAGTGA ACGCTTCCGT GTGGTACGCG
CAAATTAGCA GCGACGTGAA GTTTAAATTA TCGGGTGACA CTGTGGTTAT TGGTACCGAT
ATTGACCCAT GGGTTTATAT GGTCAGCGTA GGTTACACTT TCTAA
|
|---|
| Protein sequence | MNKNTVSTLI AATLLAAGFS ASVSAHQAGD IIVRAGAVVV APNESSDPVA TFGEFKVSNN
TQLGLNFGYM LTDNFGVELL AATPFSHDVS LAGVGKIAET KQLPPTLVAQ YYFGNSQSVV
RPYIGVGVNY TNFYDNEFTN DLGGALTDLS MTTSWGLAAQ AGVDYQVNKN WLVNASVWYA
QISSDVKFKL SGDTVVIGTD IDPWVYMVSV GYTF
|
|---|
| |