Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2841 |
Symbol | |
ID | 7088590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3337012 |
End bp | 3338040 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461727 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002358751 |
Protein GI | 217974000 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0625712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCT CACCTAAACA GACTCGCTCA CAACATCCAT TATCACTTGT GGGTGAAGAC AATGGCTTAC AGTGTACTGC GCAGCAAGGC TTGGTCGAGC CCGCATTGCC GTTAACCTTC TTCGAGCATG CCTCGATTGA AACGATTCAA CAGTTTATTC AACATCTGAC CGAGCCGGTG ATTATCGTCA ATGCCCAAGG TTACATTTAC TTTAGCAATA GCAAAGGTGC TGACTTACTG ACATGCCCGC AGGCCAGTTT GAAGGGACAA GATTGGCGCA ACTTTTTGAC CGAGCACCAT CAAGCTCGCT ACGACAATCT GCTGAGCAAT GATATTAAGC TAGGCAAAAA CTGCGGCATT CCAGTGCAGC ACTGCGCCGA AGAAATCACC CTCATTACCG CCTCAGGCAA AGCAAAAGAT GTCGAACTCT CCATTTCCTA CATCCCCAGC CATGAACCTC TGTTCGTGAT GATGATGCAC GATTTAACGC AGCACAAAGC GGAGAATCAA AAGCTACGTA AATTGGCCGC CACGGATTCA CTGACAGGGC TGGCGAACCG CCGATACTTC GACGAAATGC TACATCACTA TTGGGAAGAA TGCACAGGTA AGCTGCGCCC TATCAGCGTG GTGATTATCG ATGTGGATTA TTTCAAAGTG TTCAACGACC AATTCGGCCA TATCCAAGGC GACGAATGCC TACGTAAGAT TGCCAAAGTG ATTGCTGACA TAGTGCCAAT AGACATTGGC CTGGCAGCGC GTTACGGCGG TGAAGAATTC GCGCTAATTC TGCCAAGCCA CAATGCCAAA ATGGCACTGA CGATTGCCCA AAAAGTGCAG CAAGGGATTA ATGAACTGCG CTTTACTGAG CAAGGCCTGC GCGATTATGT CTCTGTGAGC GCGAGCCAAG GAATTGCGAG TGAAATCAAT GGCCAATTCC GTACCTCACT CGCCATGCTG TGCGCCGCCG ATACCGCATT GTATCGCGCC AAAGCCGATG GCCGTGACAG GATCAATACA TCGCTTTAA
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Protein sequence | MTSSPKQTRS QHPLSLVGED NGLQCTAQQG LVEPALPLTF FEHASIETIQ QFIQHLTEPV IIVNAQGYIY FSNSKGADLL TCPQASLKGQ DWRNFLTEHH QARYDNLLSN DIKLGKNCGI PVQHCAEEIT LITASGKAKD VELSISYIPS HEPLFVMMMH DLTQHKAENQ KLRKLAATDS LTGLANRRYF DEMLHHYWEE CTGKLRPISV VIIDVDYFKV FNDQFGHIQG DECLRKIAKV IADIVPIDIG LAARYGGEEF ALILPSHNAK MALTIAQKVQ QGINELRFTE QGLRDYVSVS ASQGIASEIN GQFRTSLAML CAADTALYRA KADGRDRINT SL
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