| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2838 |
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| Symbol | |
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| ID | 7088587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3331815 |
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| End bp | 3335042 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643461724 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_002358748 |
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| Protein GI | 217973997 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.199766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.195433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA GCACATTTTT CTTTGGTGAA TGGCAAATCA ATCCCAGCGC CAATAGTCTG
CTCCTTGGCA AACAAGTCAA ACAACTTGAG CCCAAGGCGA TGGATGTGCT GTTATTTCTC
TGCCAACGGG CGGGCGAAGT CGTCAGCAGT GATGAAATAG TCAGCCACTG CTGGCCGGGT
GTTGATACTG GCGATAACCC ACTACACAAG ATTATCAATC AGTTACGTAG AGCATTAGGC
GATAGCGCCA CCGATCCCAC CTATATAGAA ACCATACGCA AACGCGGCTA TCGCACCTTA
GCCGAAGTGC GTTTTCCTAT CGGCCACGAA GCCACCGCCA GCCCGCAAAG TTGGCAAGGC
GGCTCGCCCT TTCCGGGTCT GCAAGCCTAT AGCGCTAACT ATGCCGAGGT GTTTTTTGGT
CGCAGTGAAC AAATCAGCAC TTTGCTTAAC CGTATCTGCC AGCAAATCAT CTATGGTCGT
GCCTTCTGTC TGGTTTTAGG CCCAAGTGGC AGCGGTAAAT CCTCCCTGAT AAATGCGGGT
GTTGTACCCA ATTTAATGAA GGGCGGCGGC TATAACGGCA TTGGCGTTGC GTCATTCAGC
AGCTTAGATT TTGCCGATGT GAGTAAAGGG CAACTGCTAA CCGATCTTGC CAGCGCTATG
CTCGACTGGG AAATCAATGA CACGCCAGTG TTCGAAGGCA TGAGCGCCGA TACACTGGCG
GTTCAACTCA TCGAAGATAT CCAAGGCGTA ATCAACCAGT GCACCCAAGC ACTCAAGGTT
CAGTCCTTTA CTCAGCCGTT TTTTGCCTTG TTTATCGACC GATTAGAAGT GTTGCTCTCA
TCACCGCTAT TTAGCGACAC CGAGCGCACA GTATTTGTTG AACTGCTGGA ACAACTCGCC
ACCTCTAAGG CCGTGATTAT TATCAGTGCC TGTCGCAACG ATTTTTACCC TTTACTTGTG
GGCTACCCAA GCTTAATGGC CGGCAAATCC CGCGGCGCCC ACTTTGACTT AGCGCCGCCG
ACACGCACTG AACTGTTGCA AATGATCCGC CTGCCTGCGG TGGCCGCCAA CTTAAGCTGG
GAAGTTGACA GTGAAACCGC GATGCCGCTC GATGAAATGC TCTGCAGCGA CGCCGCCAGT
AACCCGGATG CGCTGCCCAT GTTGCAATAC ACGCTGCAGG CCTTGTATTT GCAGCGCAGC
GCCGACGATA AGTTATTAGT CTCGGTTTAT CATGCCCTTG GCGGTATTGA AGGGGCGATT
GGTAAAAATG CCGAGCAAGC GATTTCCCAT TTAAGCGATG TCGAAAAAGC CAGTCTGCCA
CGGATTTTAT CCCTGTTAGT CACCCTGCGC GAAGATGAAA AGTCCATCAC CAGCCGCACC
GCCCGCTGGT CGCAGTTGCA AAGCACCGCC GAAATCGCCC TAGTGCAAGC CATGGTCGAT
AGCCGCTTAT TCGTGTCGCA TCTGCAAAAT GGTGAACCCT GTTTTAGCAT CGCCCACGAA
GCCCTGCTGC ACCGTTGGCC ACGGGCGACG GCTTGGATTA ACGAACATAG CGACAGCTTG
AGTATTAAGA GTCGCCTACA GCATCTTTCA ACACGCTGGC TCAGCGAAGC CAAACACAGC
GCCTATCTAC TCGCTGAAGG TAAACCTTTA AAAGAAGCCC AAAGCCTCAG CCAAAATCCG
TTATTCGACT TAGACGATCC CGAAACCGCC TTTATCGCAG CCTCCACCAA ACGCGCCAAT
ATGTTGCGCT GGACGAGGCG CATCACCGTC GCCCTGCTGT GCGTACTCAC CTTAACCTCA
GTCATTATGA GTGTGCGCAG CATAGAAGCT GAAAAACTCG CCCTGCAAAA ACGCCTCGCC
GCCGAAGATT TACTCGGTTT CATGGTGGGC GACTTCGCCG ACAAGATGCG CGGCATCGGC
CGAATGGACT TACTCGACGG GATCAGCAAT AAAGCACTGG AATATTTCAG TGATTTCTCC
AGCCCAGACG ATGAAAAGTA CTTAAGCTTC GACGCCCGCT TCCAGCATGG GCAAACCTTA
GAGGCCATGG GCGAAGTCGC CTATTCACGC AATAAAATCG ATGAAGCCCG CAGCGCCCTA
ATCGCAGCGC AGGAAAAAAT GCTGCCGCTG CTCGAATTGC AGCCGGAAAA CTTAGCCCTG
CTAAAAACCT TAGGTGCCAA TGCCTTTTGG TTGGGTCAGC TTAAATATGA TGTCAAAGAT
TGGACGGCAT CGCACCCCTT CTTCGAGCAG TACTTAGCTT ATAGCCAAAC CATGTATGCC
CTAGCGCCAG AGGATAAAGA TGCGCTCATG GAGCTATCCT ATGCCCATAA CACCTTGGGC
TCAGTGTCGA TGAAACAACA GGACTTTGCC AAAGCGCAGC AAGATTTCGA GGAGTCACTA
CGACTTAAAC TATTGGCGCT GGCCAAAGCC CCCGAGGATA GTCAACTGAT TGCCGATGTG
GCTAATGCGC GTTCTTGGTT AGCAAGTGCA GCGCTCTCAC AAGGCGATTT GCTATCGGCG
ATAAATATTC ATATTCAACT CCAACAAGAG CTGAGCAAAA ATATTAATCA ACCGTATATT
TTAGATAGAC TATCAGCGAG CCATCAAATT CTAAGTGAGT TATATGACTA TCAAAACCAA
ATAGATTTAT CTCTACGTCA AGCTCAACTT GGTTTGGAAG CAATTTCAAG AGCGTTAGAG
CAAGACCCAG GCAATGATAT ATGGATAAGA CAAAAATACA CTTTGAACTT TAATCTTCTA
GCACTCTCAA ATGCAGAGTC AAATGATGTT TCTAGTTTAA AGGATTTACT AGATTCCGAT
ATAAAATTAA GTTCATCAAC AAAAAGAGAT GAGATTTACG CAAGTTATTT TCTGGCGTCA
GCAAAACACT TACAGCGACA AGGACTGATT ACTGAAAGCA GATATTATGC ATCTGAAGCA
AGACATAAAT TCCAGAAAAT ATCAGAAAAG TTCAACCAAA GCACAAACTT CACATCAAGT
TTAGCTGAGA GTATATTATT AGAAGCAAAA ACTGTTCAAG ATGAAAAAAC AAAGAGTGAG
TTATGTAATG TTGCGAAGAA TTTAATATCA CCAATACTTG AAAAAGATAA ATCACCAGAC
TTTACTGTCA TCTATATAAA GTCACTTGAC TGCCTCGGTG AAGTTGTAAA TGATGAAGAC
TTAAAAAAAT TATTATTTGA GTCTCTTATA GTTAATACTA AATTTTAA
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| Protein sequence | MNDSTFFFGE WQINPSANSL LLGKQVKQLE PKAMDVLLFL CQRAGEVVSS DEIVSHCWPG
VDTGDNPLHK IINQLRRALG DSATDPTYIE TIRKRGYRTL AEVRFPIGHE ATASPQSWQG
GSPFPGLQAY SANYAEVFFG RSEQISTLLN RICQQIIYGR AFCLVLGPSG SGKSSLINAG
VVPNLMKGGG YNGIGVASFS SLDFADVSKG QLLTDLASAM LDWEINDTPV FEGMSADTLA
VQLIEDIQGV INQCTQALKV QSFTQPFFAL FIDRLEVLLS SPLFSDTERT VFVELLEQLA
TSKAVIIISA CRNDFYPLLV GYPSLMAGKS RGAHFDLAPP TRTELLQMIR LPAVAANLSW
EVDSETAMPL DEMLCSDAAS NPDALPMLQY TLQALYLQRS ADDKLLVSVY HALGGIEGAI
GKNAEQAISH LSDVEKASLP RILSLLVTLR EDEKSITSRT ARWSQLQSTA EIALVQAMVD
SRLFVSHLQN GEPCFSIAHE ALLHRWPRAT AWINEHSDSL SIKSRLQHLS TRWLSEAKHS
AYLLAEGKPL KEAQSLSQNP LFDLDDPETA FIAASTKRAN MLRWTRRITV ALLCVLTLTS
VIMSVRSIEA EKLALQKRLA AEDLLGFMVG DFADKMRGIG RMDLLDGISN KALEYFSDFS
SPDDEKYLSF DARFQHGQTL EAMGEVAYSR NKIDEARSAL IAAQEKMLPL LELQPENLAL
LKTLGANAFW LGQLKYDVKD WTASHPFFEQ YLAYSQTMYA LAPEDKDALM ELSYAHNTLG
SVSMKQQDFA KAQQDFEESL RLKLLALAKA PEDSQLIADV ANARSWLASA ALSQGDLLSA
INIHIQLQQE LSKNINQPYI LDRLSASHQI LSELYDYQNQ IDLSLRQAQL GLEAISRALE
QDPGNDIWIR QKYTLNFNLL ALSNAESNDV SSLKDLLDSD IKLSSSTKRD EIYASYFLAS
AKHLQRQGLI TESRYYASEA RHKFQKISEK FNQSTNFTSS LAESILLEAK TVQDEKTKSE
LCNVAKNLIS PILEKDKSPD FTVIYIKSLD CLGEVVNDED LKKLLFESLI VNTKF
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