| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2833 |
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| Symbol | |
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| ID | 7088582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3325899 |
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| End bp | 3327050 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643461719 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002358743 |
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| Protein GI | 217973992 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.121026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.828234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAA CGAAAGGTTT AACGATGTTG AATGACCAAG ATTTCAGTCG CAATCGTTTC
AGTAAAAACA ACTCAAGTAA CAGTTTAAGT AAAAACAGGT TAAGTAGCAG GAAGTTAAGC
AACAGCAACT TAAGTAATAA TAAGTTAACT AATCAAACCG CATTAGCTAA GAGAGTCGCG
ACAGGTGTCG TTTTAGGCTG TTTGCTGCTG CAGTTAGCGG CTTGCAGCCA AGAGTCGCCG
AGCGTCCTTG GCACAGTCGA GCGTGACAGA CTGACACTGA CTGCGCCCGT GGGTGAGTTG
ATTACTCAGG TAAATGTGGT TGAAGGTCAG CAGGTTAAGG CGGGCGAAGT GCTACTCACG
CTCGATTCGA CCTCGGCCAA TGCGCGCCTT GCCCTGCGTC AAGCCGAGCT TGAACAGGCC
AAGGCTAAAC TTTCTGAGGC GGTGACTGGC GCGCGTTTAG AAGATATAGA ACGCGCCAAG
GCTGTACTCG ATGGGGCGAA TGCCAGCGTG AAGGAAGCGC AGCGTGCCTT TGAGCGTACC
AACCGTTTGT ATGCCACGAA AGTGCTGAGC CAAGCGGATT TAGATACCGC CCGTGCGGCG
CGGGATACCA GTTTAGCCAA GCAAGCCGAG GCGGAGCAAA GCTTGCGCCT ATTAGAAAAT
GGCACCCGTA GTGAGCAGCT AGAACAAGCC AAAGCAGCGG TGGCCGCCGC CAGCGCCAGT
GTCGCCATCG AACAAAAAGC CTTAGCCGAC TTAAGCTTAG TGGCAGCGCG TGATGCCGTT
GTCGATACGC TACCTTGGCG AGTCGGCGAT CGCATTGCAG CGGGTACTCA GTTGATAGGT
TTGTTGGCGA GTGAGGATCC CTATGTACGG GTTTACCTGC CCGCGACTTG GTTAGACAGA
GTGAAGGCAG GTGATAGCGT CAATATTCTT GTGGATGGCC GCGAAATGCC GATTGCTGGC
ACAGTGCGCA ATATCCGCAG TCAACCCGCT TACACGCCGT TTTATGCGCT TAATGAACGT
GACCGAGCAC GGTTGATGTA TCTGACAGAT ATTACTATTT CTGCCGAAGG TCAGGATTTG
CCGACGGGCA TGGCATTAGC TGTGGAACTC GATGTGCAGC CAAAAGTGCA ACAAAAAGTG
AAACAGCCAT GA
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| Protein sequence | MSSTKGLTML NDQDFSRNRF SKNNSSNSLS KNRLSSRKLS NSNLSNNKLT NQTALAKRVA
TGVVLGCLLL QLAACSQESP SVLGTVERDR LTLTAPVGEL ITQVNVVEGQ QVKAGEVLLT
LDSTSANARL ALRQAELEQA KAKLSEAVTG ARLEDIERAK AVLDGANASV KEAQRAFERT
NRLYATKVLS QADLDTARAA RDTSLAKQAE AEQSLRLLEN GTRSEQLEQA KAAVAAASAS
VAIEQKALAD LSLVAARDAV VDTLPWRVGD RIAAGTQLIG LLASEDPYVR VYLPATWLDR
VKAGDSVNIL VDGREMPIAG TVRNIRSQPA YTPFYALNER DRARLMYLTD ITISAEGQDL
PTGMALAVEL DVQPKVQQKV KQP
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