Gene Sbal223_2831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2831 
Symbol 
ID7088580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3323835 
End bp3324956 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content52% 
IMG OID643461717 
ProductABC-2 type transporter 
Protein accessionYP_002358741 
Protein GI217973990 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.335891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGTA GAATTTTTGC AATTGTCGTC AAAGAGCTGC GGCAATTATC ACGGGATCGT 
ATGACCTTTG GCATGATAGT CATGATCCCG CTGGTGCAAT TGATGTTGTT TGGTTATGCC
ATCAATACCG ATGCGCGCCA TCTGCCCGCG GGGCTGGTAA ATTTGAGCGA TTCTGCCTAC
AGCCGCTCAT TGGTGCAGGC GGTGGAAGCG ACGCAGGTGG TGGATTTTAA ACAGCGTTAT
TTAAGTGCGG CCGAGGCAGA GGCGGCGATC ACTCGCGGCG AAGTTAAAGC TGTGCTTTAT
TTGCCCGCCG ATCTCGATGA GCGCTTAGTG CGTCACCCAA GCTTTGCGGG TCAGCAATAT
TTAGCTCAGC CCGTCGGGCA ATGGCTGGTG GACGGTTCTG ATACGGTTGT CGCCTCAACC
ATTCGTAGCC TTAGGCAAAT GCCGCTGGAT GAAGTCGCAG GGAGAGCGCA AAAAACCGTG
ATGCCGAGTT TTGAAGTGGT GCAATATTTT AATCCCGAGC AACGCTCTGT AGTCAATATC
GTGCCCGGCC TGCTGGGCGT GATTTTGACT ATGACCATGG TGATGTTCAC CTCCGCCGCC
ATAGTGCGCG AGCGCGAGCA GGGCAATATG GAGTTTTTGA TCACTACGCC AGTGCGGCCG
CTGGAGTTGA TGCTGGGTAA AATCGTGCCC TATGTGATCG TCGGTTTTGT GCAAGTGACC
ATTATCCTGA GCGCAGGGCA TTTGTTGTTT GATGTGCCGA TTCGTGGCGG AATCGACTCC
ATCGCCCTTG CCGCTATGTT GTTCATTTGC GCCAGTTTAA CTTTAGGATT AGTGATTTCG
ACCATAGCGA AAACCCAGTT GCAATCGATG CAAATGACGG TATTTATCCT GCTGCCATCG
ATTCTATTGT CGGGGTTTAT GTTCCCCTAC GAAGCCATGC CCATCGCGGC GCAGTGGATT
GCCGAAGCCT TACCCGCAAC CCATTTTATG CGCATGTCAC GGGCCATAGT GCTACGCGAT
GCCCAAGTGA TGGATCTGCA ATTTGATGCC CTGTGGATGA TAGGTTTTAC CTGTATCGGG
CTATTTATCG CCAGTATGAG ATTCTCTAAG CGCTTGGATT AG
 
Protein sequence
MWRRIFAIVV KELRQLSRDR MTFGMIVMIP LVQLMLFGYA INTDARHLPA GLVNLSDSAY 
SRSLVQAVEA TQVVDFKQRY LSAAEAEAAI TRGEVKAVLY LPADLDERLV RHPSFAGQQY
LAQPVGQWLV DGSDTVVAST IRSLRQMPLD EVAGRAQKTV MPSFEVVQYF NPEQRSVVNI
VPGLLGVILT MTMVMFTSAA IVREREQGNM EFLITTPVRP LELMLGKIVP YVIVGFVQVT
IILSAGHLLF DVPIRGGIDS IALAAMLFIC ASLTLGLVIS TIAKTQLQSM QMTVFILLPS
ILLSGFMFPY EAMPIAAQWI AEALPATHFM RMSRAIVLRD AQVMDLQFDA LWMIGFTCIG
LFIASMRFSK RLD