| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2780 |
|---|
| Symbol | |
|---|
| ID | 7088529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3266729 |
|---|
| End bp | 3267385 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643461667 |
|---|
| Product | transferase hexapeptide repeat containing protein |
|---|
| Protein accession | YP_002358691 |
|---|
| Protein GI | 217973940 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.737809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0617249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACA CAACAACCCA TTCCCAATTA GGCCCAAATC CCAACGATAA AGCGCCGATG
AAAGGCTTCC CTCAGGTTGG ATTTCTTAAA AACTTTATTA CCCGCGAGAA CATTATCGTC
GGCGATTATA CCTATTATGA CGATCCTGCG GGGCCTGAAA GGTTCGAGTC GAATGTGCTT
TATCACTTTG ACTTTATTGG CGATAAACTG ATTATCGGTA AATTCTGCGC CATTGCTAAA
GACGTGAAAT TCATTATGAA TGGCGCCAAT CATCAAGTGT CAGGCTTCTC GACTTATCCC
TTTTATATCT TTGGCAATGG CTGGGAAAAG GTAATGCCTA ATCCCGCCGA TTTACCCCAT
AAAGGCGACA CCTGTATCGG TAACGATGTG TGGATTGGCT ATAACGCCAC TATCATGCCT
GGAGTGAAGA TTGGCCACGG CGCAATTGTT GCCAGTCAAT CCGTGGTGAC AAAAGATGTG
CCGCCCTACG CTGTGGTTGG TGGTAATCCT GCCACTGTCA TCAAGCTCAG GTTCGAGCAA
GATGTGATAG ATGAGCTCGT GACCATCGCT TGGTGGGATT GGCCGATAGA GAAAATCACT
CAGCATCTAC ACGCCATCGC GGGCGCGGAT CTGACTCAAT TACAGCAGGC GGCCTAA
|
|---|
| Protein sequence | MPDTTTHSQL GPNPNDKAPM KGFPQVGFLK NFITRENIIV GDYTYYDDPA GPERFESNVL
YHFDFIGDKL IIGKFCAIAK DVKFIMNGAN HQVSGFSTYP FYIFGNGWEK VMPNPADLPH
KGDTCIGNDV WIGYNATIMP GVKIGHGAIV ASQSVVTKDV PPYAVVGGNP ATVIKLRFEQ
DVIDELVTIA WWDWPIEKIT QHLHAIAGAD LTQLQQAA
|
|---|
| |