| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2774 |
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| Symbol | |
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| ID | 7088523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3262283 |
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| End bp | 3263932 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643461661 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_002358685 |
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| Protein GI | 217973934 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00267346 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGA AACTCCCTCG CCAAGCCACA GCATCCGAAG AAAGTCTGCT CCGCATTTTT
ACTGCACCGG AAGATGCAGG ATCAACGCTG AGTATTATCG AGCAGAAGCT CTCCGAGGAC
TTAGCAGGCT TTTTGGGTGA CAGTATCGCC GCGCTCGAAA AACCCTTGTC GGAAATTGAA
ACCGATTTTC AAGCCTTTGA GATCCCAACT CAGCCGCGTT TTGTTTCCGA TTACACCGAC
GAAATTATGC AAAATCTGGT GGCGCATTCG GTACACACAG CGGCACCAAG TTTTATCGGC
CACATGACGT CGGCACTGCC CTACTTTGTG TTGCCGCTGT CGAAAATGAT GGTGGGACTG
AATCAAAATC TGGTCAAAAT CGAAACCTCA AAGGCATTTA CGCCGCTTGA GCGCCAAGTG
CTCGGCATGA TGCACCATTT GATTTACGAC CAAGATACGG ATTTTTATCA AAGCTGGATG
CACAGCGCCA ATCATTCCCT CGGCGCATTT TGCTCCGGCG GCACAGTGGC CAACATCACG
GCCCTGTGGA TTGCCCGTAA CCAATTATTG AAGGCCGATG GCGAGTTTAA AGGCGTCAGC
CGCGAAGGCT TACTCAAGGC ACTGCGCCAC TATGGCTATG ACGATTTAGC GATTTTAGTC
TCGGAGCGAG GTCACTATTC GCTGGGCAAA GCCGTCGATC TGCTTGGTAT CGGCCGCGAC
AATATCATCA GCATTCCCAC GGGCAGCGAT AACAAGGTCG ATGTCGCGAA AATGCGCCAA
GCCGCCCTTG AACTTGCCCG TAAAAACATC AAAGTGTTGG CGATTGTTGG CGTGGCAGGC
ACCACAGAAA CCGGTAATGT TGACCCACTG GCAGAGTTAG CGGCGCTGGC AAAAGAGTTA
AACTGCCATT TCCATGTGGA TGCAGCGTGG GGCGGAGCAA GTTTATTATC CAATAAATAC
CGCCACTTAC TCGCTGGTAT CGAACTTGCC GATTCAGTCA CCATCGATGC CCACAAACAA
ATGTACGTGC CCATGGGCGC AGGTATGGTG TTATTTAAAG ACCCAGAGTT TGCCCACGCC
ATCGCACATC ACGCCGAATA CATTCTGCGC CGTGGTTCAA AGGACTTAGG CAGCCAAACG
CTGGAAGGTT CGCGCCCCGG CATGGCGATG TTAGTACACG CTTGCTTGCA AATCATCGGC
CGCGATGGGT ATGAAATCTT AATCAATAAC AGTCTTGAAA AAGCGCGTTA TTTTGCAGAG
CAAATCAAAG CCCATGAGGA TTTTGAGCTG GTCACTGAGC CAGAACTGTG TCTGCTGACT
TACCGTTATG TCCCCGCCCG CGTACAAGCC GCCATGAAGC TGGCCTGTGA GCAAGCAGAC
ACGATAAGAG TCGCCCGCTT TAATGAGCTG CTCGATGGCC TCACTCAGTT TATTCAAAAG
CACCAACGCG AACAGGGTAA ATCCTTCGTC TCCCGCACCC GCATTCAGCC AGCCCGCTAT
TTTAGGCAAG CAACCGTGGT ATTCCGTGTA GTACTCGCTA ACCCCCTCAC CAGCCATGAC
ATCCTCAATC AAGTGCTGGT AGAACAAAGT GAAATCGCTG CATTAGATAA CGAGTTTTTA
CCCGCACTCA TGGCGATGGT TGCCCAATAG
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| Protein sequence | MTQKLPRQAT ASEESLLRIF TAPEDAGSTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE
TDFQAFEIPT QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL
NQNLVKIETS KAFTPLERQV LGMMHHLIYD QDTDFYQSWM HSANHSLGAF CSGGTVANIT
ALWIARNQLL KADGEFKGVS REGLLKALRH YGYDDLAILV SERGHYSLGK AVDLLGIGRD
NIISIPTGSD NKVDVAKMRQ AALELARKNI KVLAIVGVAG TTETGNVDPL AELAALAKEL
NCHFHVDAAW GGASLLSNKY RHLLAGIELA DSVTIDAHKQ MYVPMGAGMV LFKDPEFAHA
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE
QIKAHEDFEL VTEPELCLLT YRYVPARVQA AMKLACEQAD TIRVARFNEL LDGLTQFIQK
HQREQGKSFV SRTRIQPARY FRQATVVFRV VLANPLTSHD ILNQVLVEQS EIAALDNEFL
PALMAMVAQ
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