| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2761 |
|---|
| Symbol | |
|---|
| ID | 7087140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3241359 |
|---|
| End bp | 3242318 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643461648 |
|---|
| Product | cytochrome C family protein |
|---|
| Protein accession | YP_002358672 |
|---|
| Protein GI | 217973921 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.309572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000367908 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA GGCTAAAGTT CAAAAGCATA GCTAAGGCTA TGCTATGTAT TTTGTTATCA
ATCGTCAGTA TTTCGGCCTC GGCGACGCCT TGGGATGACA AAAAACCAGA GGATGTTGTC
GCGACATTAG ACAAAAAATT CGCCGAAGGT AAGTATTCCG CCAAAGGGGC TGACACTTGC
CTGATGTGTC ACAAAAAAAG TGCCGTGGTC ATGGCGATAT TTGATGGGGT TCATGGCAAC
CCCAATGTGA AAGATTCGCC CATGGCCGAT TTGCAGTGTG AAGCCTGCCA CGGTCCGTTA
GGGAATCATA ACAAAGGTGG CAAAGAGCCA ATGATCACCT TTGGTGCAAA TTCTTCTGTT
CCCGCGCAAA AGCAAAACAG TGTTTGTATG AGCTGCCACA ATGACAGTCA ACGCATCGCG
TGGAAAGGCA ATCACCACGA TAACGCCGAT GTTGCCTGCG CAAGTTGCCA TCAAGTTCAT
ACCGCCAAAG ATCCTATCAG CGATAAAGCC AATGAAGTCG CCATTTGTAC CCAGTGCCAT
ACCCAACAAA AAGCTGATAT GCACAAACGC TCAGCGCATC CACTACAGTG GCAACAGATG
GTGTGCAGTG ACTGCCATAA TCCCCACGGC AGTTTGAACG ATTCAAGCTT GAAGCAAATG
AGCGTCAACG AAAATTGCTA TAGCTGCCAC GCCGAAAAAC GCGGCCCTAA ACTGTGGGAA
CATGCCCCCG TCACCGACAA CTGTGCGAAT TGCCACAATC CCCATGGCAG CGTGAACGAA
GCCATGCTGA TCAGTAAGCC GCCGCAGCTT TGTCAACAAT GCCACGCCTC GGATGGTCAT
AGCAGCAATG CCTACTTTGG CAATCAAACC AATGCCTTCA CTTCAGGTAA TTCCTGTATG
AATTGCCACG GGCAAGTGCA TGGTTCTAAC CATCCTTCTG GCAAATTGCT ACAGAGATAA
|
|---|
| Protein sequence | MEIRLKFKSI AKAMLCILLS IVSISASATP WDDKKPEDVV ATLDKKFAEG KYSAKGADTC
LMCHKKSAVV MAIFDGVHGN PNVKDSPMAD LQCEACHGPL GNHNKGGKEP MITFGANSSV
PAQKQNSVCM SCHNDSQRIA WKGNHHDNAD VACASCHQVH TAKDPISDKA NEVAICTQCH
TQQKADMHKR SAHPLQWQQM VCSDCHNPHG SLNDSSLKQM SVNENCYSCH AEKRGPKLWE
HAPVTDNCAN CHNPHGSVNE AMLISKPPQL CQQCHASDGH SSNAYFGNQT NAFTSGNSCM
NCHGQVHGSN HPSGKLLQR
|
|---|
| |