| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2749 |
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| Symbol | clpX |
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| ID | 7087128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3226447 |
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| End bp | 3227727 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643461636 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_002358660 |
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| Protein GI | 217973909 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000397165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.558913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCGACA ACAAAAATAA TGGTGACAGC GGTAAATTGC TGTACTGCTC TTTTTGCGGA
AAGAGCCAGC ATGAAGTCAG AAAACTCATT GCTGGCCCAT CAGTGTATGT ATGCGACGAA
TGTGTTGAGT TATGTAACGA CATCATTCGC GAAGAGATTA AAGAAATCTC TCCAAAGCGC
GATAGCGATA AGTTACCGAC ACCACATGAG TTGCGTGCAC ATTTAGACGA TTATGTGATT
GGCCAAGACA GGGCTAAGAA AGTGCTGTCT GTGGCAGTGT ATAACCACTA TAAGCGTTTG
AAAAATGCGT CGCCTAAAGA TGGTATCGAG CTGGGTAAGA GTAACATTTT ACTTATCGGT
CCAACGGGTA GTGGTAAGAC GCTGTTGGCT GAAACCCTTG CGCGCTCACT CAATGTGCCT
TTCACTATGG CCGATGCCAC AACACTGACT GAAGCGGGTT ATGTGGGTGA AGACGTTGAA
AACATCATTC AAAAGTTGCT GCAAAAGTGC GACTACGATG TAGAGAAAGC GCAGCGTGGT
ATCGTTTATA TCGATGAAAT TGATAAAATT AGCCGCAAGT CAGACAATCC ATCGATCACC
CGTGACGTAT CGGGTGAGGG CGTGCAGCAA GCGCTGCTTA AGCTGATTGA AGGTACTGTT
GCCGCGGTTC CACCACAAGG TGGCCGTAAG CATCCACAGC AAGAATTCTT ACAAGTCGAT
ACTTCTAAGA TCCTGTTTAT CTGTGGCGGT GCGTTTGCAG GGCTTGAGAA AGTGATTGAG
CAACGTGCAC ACGTTGGTTC GGGTATCGGT TTCGGTGCTC AGGTAAAAGG CGAAAAAGAA
AAGGCGACGA TTTCTGAAAC CTTAACTCAA GTTGAACCTG GCGATTTGGT CAAATATGGC
TTAATTCCTG AGTTTATCGG CCGTCTGCCA GTGGTTGCGA CTCTGACTGA GCTGGATGAA
GAAGCCCTAG TGCAAATTTT ATCTCAACCT AAAAATGCCC TGACTAAGCA GTACAGTGCG
TTATTTGAGA TGGAAGGCGT CGAGCTTGAG TTCCGCGAAG ATGCGCTTAA AGCGATAGCA
CACAAGGCGA TGTCACGTAA GACAGGTGCC CGTGGTTTAC GCTCAATCGT TGAAAGTATT
CTACTGGATA CTATGTACGA TATTCCTTCT GTCGATGGTG TAGTGAAGGC CGTTGTCGAT
GAATCAGTCG TGAAAGGTGA ATCTGCACCT ATCCTGATTT ATGAGCACAA TGAAGCCCAA
GCAGCCTCTG GCGAGCAATA A
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| Protein sequence | MGDNKNNGDS GKLLYCSFCG KSQHEVRKLI AGPSVYVCDE CVELCNDIIR EEIKEISPKR
DSDKLPTPHE LRAHLDDYVI GQDRAKKVLS VAVYNHYKRL KNASPKDGIE LGKSNILLIG
PTGSGKTLLA ETLARSLNVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV AAVPPQGGRK HPQQEFLQVD
TSKILFICGG AFAGLEKVIE QRAHVGSGIG FGAQVKGEKE KATISETLTQ VEPGDLVKYG
LIPEFIGRLP VVATLTELDE EALVQILSQP KNALTKQYSA LFEMEGVELE FREDALKAIA
HKAMSRKTGA RGLRSIVESI LLDTMYDIPS VDGVVKAVVD ESVVKGESAP ILIYEHNEAQ
AASGEQ
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