Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2723 |
Symbol | |
ID | 7087102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3196540 |
End bp | 3197751 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643461610 |
Product | porin Gram-negative type |
Protein accession | YP_002358634 |
Protein GI | 217973883 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000866519 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000818773 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGA CGTTAGTAGC AACTGCGCTT GCAGCAATTT TTTTAGTACC ATCAGTCTCG GCTATCGAGA TCTATAAAGA TAATAAAAAT GCCGTAGAAA TCGGTGGTTT TATTGATGCA CGCGTGATCA ACACTCAAGG GGAAACTGAG GTTGTTAACG GCGCATCTCG CATTAATTTT GGTTTTAATC GTGAGTTGAC TGACGGTTGG AAAGCCTTTG CTAAATTAGA GTGGGGCGTA AACCCAGTTG GTAGCAGCGA TATCGTCTAT AACAATCGCT TCGAATCTGT TCAAGAAGAG TTCTTCTATA ACCGTTTAGG TTACGCAGGT TTATCCCATG ACACTTATGG AACACTAACT ATCGGTAAGC AGTGGGGTGC TTGGTACGAT GTCGTTTACA ACACTAACTA CGGTTTTGTG TGGGACGGCA ACACTGCAGG TGTTTACACT TATAACAAAG ATGACGGCGC GGTAAACGGC GTGGGTCGTG GTGATAAAAC GGTCCAGTAT CGCAATGCCT TTGGCGATGT TAGCTTCGCA GTTCAAGCGC AGTTGAAAAA CAGCAGCTTC TATACCTGTG ATACTACAGA TGATATCAGC CAAGCTCAGT GTCAAGCGAA CTGGGAAAGT GGTGATAAAG CGGCTCAACA AGTTGAGTAC AATTACACCT ATGGTGGCGC GCTGACCTAT AAAGCCACTG ATATGTTGAC TTTAACTGCG GGTATTAACC GTGGTGAGTT TGAAGTAAGC TTTGGTAATG GTGAGCAAAG AACTGCCATT GATGTTATCT ATGGTGCCGG AATCACTTGG GGCAACTTCG ATAACGATGG TTTATATGCT GCTGCAAACT TTAACAGACA AGAAAACCAT GATACTGACA ACATTGGTCG TTTGATCAAA GATGCCTATG GTATTGAAAG TTTAGTTTCT TACAAGTTTG ATAATGGCCT ACGTCCATTC ATTTCTTACA ACGTGCTTGA TGCGGGTAAA GACTATGTCA TCCAGCCTAA CTTCAATGCC GATCCTAACG ATGAATTCAA ACGTCAGTTC TTAGTTGTCG GTTTACACTT TGTATGGGAC CCAAATACAG TTCTGTATAT AGAAGCACGT AAAGATTACA GTGATTTTAC CAGCGCAGAC AAAGACCAAG AAGCCAGAAT GGCACTTTCT GAATCTGATG GCGTAGCAAT CGGTATCCGT TACACGCTCT AA
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Protein sequence | MNKTLVATAL AAIFLVPSVS AIEIYKDNKN AVEIGGFIDA RVINTQGETE VVNGASRINF GFNRELTDGW KAFAKLEWGV NPVGSSDIVY NNRFESVQEE FFYNRLGYAG LSHDTYGTLT IGKQWGAWYD VVYNTNYGFV WDGNTAGVYT YNKDDGAVNG VGRGDKTVQY RNAFGDVSFA VQAQLKNSSF YTCDTTDDIS QAQCQANWES GDKAAQQVEY NYTYGGALTY KATDMLTLTA GINRGEFEVS FGNGEQRTAI DVIYGAGITW GNFDNDGLYA AANFNRQENH DTDNIGRLIK DAYGIESLVS YKFDNGLRPF ISYNVLDAGK DYVIQPNFNA DPNDEFKRQF LVVGLHFVWD PNTVLYIEAR KDYSDFTSAD KDQEARMALS ESDGVAIGIR YTL
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