Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2698 |
Symbol | |
ID | 7087077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3165656 |
End bp | 3167011 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643461587 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002358611 |
Protein GI | 217973860 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.029027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000852127 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAATTTA CCGATTTTTC TCTGGACCAG CGTCTGCTTC AAAGCATAAA ACATATGGGG ATCACAGAAC CCACCGCCAT CCAGGAACAA GCACTGCCTA TCGCATTGGC AGGTAAAGAT TTAATGGCGT CATCAAAAAC GGGCTCAGGT AAAACCTTAG CGTTTTTGTT ACCCGCATTG CAAAGAGTCA TTTCTACCCG CTCACTGTCA AAACGCGATC CTAGAGTATT GATTTTATTA CCGACCCGCG AACTAGCACA CCAAGTGTAT AGTCAACTTC GCCTGCTGGT CGCCAACACC CAATACAAGG CCATCAGCGT TCTGGGCGGT GAAAACTTTA ACGACCAAGC GAAAGCCCTA GCGAAAGAAC CGCATTTTAT TGTCGCGACG CCAGGCCGTA TCGCCGATCA TCTAGAGCAA AAACATCTAT TTCTGAATGG GTTAGAGTTA CTCGTGCTCG ATGAAGCCGA CCGCATGTTA GATTTAGGCT TTGCCCCGCA GTTGAAAGCC ATCAACGATG CTGCCGATCA TAAACGTCGT CAAACGCTGA TGTTTTCTGC CACCTTAGAT CATTACGAAA TCAATGATAT CGCGGCAACA CTGCTAAAAA ATCCAGCGCA CGTGGCGATT GGCGCGGCTC ACTCTGAGCA TAACGACATT CACCAACGCA TCTTCTTATG TGACCACTTA GACCACAAAG AAGCGTTATT AGCCCGTTTA CTTAAAGATG AAACCCACAA GCAAGTGATC ATCTTTACTG CGACGCGCCC AGATACAGAA CGCTTAGCTG CTAAATTAAT TGAGCAAGGT TTTGCAACCG CCGCACTCAG CGGTGATTTA AAGCAAGCCG CACGCAACCA AATCATGGAC CAATTTGCCC GTGGCCAACA ACAAGTCCTA GTGACGACCG ATGTCGCCTC TCGTGGTCTG GATTTGCTCA ATGTGTCCTT AGTTGTTAAC TTCGACATGC CTAAATTTGC CGAGGAATAC GTGCATCGTA TCGGTCGTAC TGGCCGTGCT GGTGCGAAAG GTGATGCGAT ATCGCTCGTC GGGCCTAAAG ATTGGGACAA CTTTAAGAAA GTCCAAGTCT TCCTTAGAAA GACCTTTGAG ATCAGTACGA TTCCAGGTCT AGAAGCTAAA TTTAGTGGTC TAAAAAGCAA AGCCAAACAG ACACCAGCAA AACGTGTTGC TAAAGCCGAG CTTGCTAAAG GTAAGAGCAA AAGAACTAAA GCAGCCACAC CGGCGCCTTC ACGGGATAAG CGTTTTATCA CGGGCGTGGA CATTGGCGAT GCACCAATGC GTAAAAAGCC TGCTGCGGCG AAATTACTGC AAGACAATGA TACAGAAGAA GTTTAG
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Protein sequence | MQFTDFSLDQ RLLQSIKHMG ITEPTAIQEQ ALPIALAGKD LMASSKTGSG KTLAFLLPAL QRVISTRSLS KRDPRVLILL PTRELAHQVY SQLRLLVANT QYKAISVLGG ENFNDQAKAL AKEPHFIVAT PGRIADHLEQ KHLFLNGLEL LVLDEADRML DLGFAPQLKA INDAADHKRR QTLMFSATLD HYEINDIAAT LLKNPAHVAI GAAHSEHNDI HQRIFLCDHL DHKEALLARL LKDETHKQVI IFTATRPDTE RLAAKLIEQG FATAALSGDL KQAARNQIMD QFARGQQQVL VTTDVASRGL DLLNVSLVVN FDMPKFAEEY VHRIGRTGRA GAKGDAISLV GPKDWDNFKK VQVFLRKTFE ISTIPGLEAK FSGLKSKAKQ TPAKRVAKAE LAKGKSKRTK AATPAPSRDK RFITGVDIGD APMRKKPAAA KLLQDNDTEE V
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