| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2690 |
|---|
| Symbol | ribA |
|---|
| ID | 7087069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3157540 |
|---|
| End bp | 3158154 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643461579 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_002358603 |
|---|
| Protein GI | 217973852 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00100841 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATAA AATATGTCGC GACGTCAAAG TTACCCACTC CTTGGGGCGT GTTTGCCATG
CATGGTTTTG AAGATACAGA ATCAGGCAAA GAGCATGTTG CGCTCACATT CGGTACGCTC
AGTGCGGATG AACCTGTGTT GGGTCGAATT CATTCCGAGT GTTTAACTGG CGATGCGTTA
TTTAGCTTGC GTTGTGACTG TGGTTTTCAG TTACAAGCGG CGATGCAAAA TATTGCGGAA
ACGGGCAGTG GCTTTATCCT CTATTTGCGC CAAGAAGGCC GTGGCATTGG TTTGTTGAAT
AAAATCCGCG CCTACGAGCT GCAAGATAAA GGTGCCAACA CAGTTGAAGC CAACGAGCAA
CTGGGCTTCG AAGCCGATAT GCGTAAATAC GACATGATCA AACCTATGCT GGAACAGATA
GGCGTGAAGC ATGTGCGTTT GATGACCAAT AACCCTCGTA AAGTGAAAGC AATGAAGGAG
TTTGGCATCG AAGTGGTTGA GCGCGTACCG CTGCAAGTTG GTAAGAATCG TTACAACGAA
GCCTACTTAA AAACCAAATC CACTGAGCTT GGACACATGA TGTCTGAATA TCATTTTATG
GATGAAAATA AGTAG
|
|---|
| Protein sequence | MSIKYVATSK LPTPWGVFAM HGFEDTESGK EHVALTFGTL SADEPVLGRI HSECLTGDAL
FSLRCDCGFQ LQAAMQNIAE TGSGFILYLR QEGRGIGLLN KIRAYELQDK GANTVEANEQ
LGFEADMRKY DMIKPMLEQI GVKHVRLMTN NPRKVKAMKE FGIEVVERVP LQVGKNRYNE
AYLKTKSTEL GHMMSEYHFM DENK
|
|---|
| |