| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2657 |
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| Symbol | |
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| ID | 7089942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3121651 |
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| End bp | 3125115 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461546 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002358570 |
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| Protein GI | 217973819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00498519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000418055 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCGAA GCGCGATGTT TGATGACCTC TATTTAAAGA AGAATGACGT CATCATGAAA
CGTATGTTAA TCAATGCAAC TCAATCAGAA GAGTTGCGTG TTGCCCTTGT TGATGGGCAA
CAACTGTATG ATCTAGATAT TGAAAGTCCA GGTCATGAGC AAAAAAAATC AAACATTTAC
AAAGGTAAAA TTACCCGCGT AGAACCGTCT TTAGAAGCCG CTTTCGTCGA CTACGGTGCT
GATCGTCACG GCTTTTTGCC ACTGAAAGAA ATCGCCAGAG AATATTTCCC GAAAGGATAT
TCGTTCCAAG GTCGCCCAAA TATCAAAGAA GTTGTCAGTG AAGGACAAGA AGTTATTGTC
CAGATTGATA AAGAAGAACG CGGCAATAAA GGCGCAGCCT TAACGACCTT CATCAGCCTA
GCAGGCTCTT ACTTAGTATT AATGCCAAAC AACCCACGTG CAGGCGGAAT TTCTCGTCGT
ATCGAAGGTG ATGAGCGCAC TGAGCTAAAA GAAGCGATGG CCGATTTGGA AGTGCCAGCG
GGCATGGGTC TTATCGTACG TACTGCCGGT GTTGGCAAAG AGTCTGCCGA GTTAAAGTGG
GACTTAAAAG TTCTGCAGCA CCACTGGGCA GCAATCACCG AAGCTTCACA GGTTAAAGGC
GCTCCTTTCT TAATTCACCA AGAAAGTAAC GTGATCGTGC GCGCTATTCG TGACTACTTA
CGTCGTGATG TGGGCGAGAT CCTCATCGAC CATCCACGTA TTTTCGAAGA AGCTAAGCAA
CATATCGCCT TAGTTCGCCC AGATTTCGTT GAGCGCGTAA AACTTTACGA AGCCGAAGTG
CCGTTATTTA CTCACTTCCA AATCGAATCA CAAATCGAAT CAGCCTTCCA ACGTGAAGTG
CGTCTGCCAT CTGGCGGTTC GATTGTTATC GACCCAACTG AAGCCTTAAC CTCAATCGAT
ATCAACTCTG CCCGTGCCAC TAAAGGCGGC GATATTGAAG AGACAGCACT GAACACTAAC
CTTGAAGCCG CCGATGAAAT TGCCCGTCAA TTACGTCTGC GTGACTTAGG TGGCTTAGTG
GTTATCGACT TTATCGATAT GACGCCTGTG CGCCATCAGC GTGAAGTTGA AAACCGCTTA
CGTGATGCTG TGCACCATGA CCGCGCTCGC GTGCAGTTAG GTCGCATTTC GCGTTTTGGT
TTGATGGAAA TGTCGCGTCA GCGTCTGCGT CCTTCTTTAG AAGAATCTGC TGCGCACATC
TGCCCTCGCT GTCATGGCCA AGGCACGATT CGCAGTACTG AATCTTTAGC ACTGTCGATT
TTACGTTTGA TGGAAGAAGA AGCCATCAAA GAGAACACCT CACAAATCGA AGCGATTGTG
CCTGTGGATG TGGCGGCTTT CTTGTTGAAC GAGAAACGCA AAGCCATTCG CATTACAGAA
CAACGTCACG ATGTCGAAGT GTATGTGATA CCTGATGCGC ACATGATGAC GCCAGATTAC
CGCGTGATCC GTCACCGTAG TGATGATGAA ATCAGTGAGT CTAGCTATAA GCGTATCGAG
CAGCCTGATG CCAAATTGTA TGAGCCACGT AAACTGGAAC GTACCGCAGC GCCTATTCCT
GCATTAAAAG GTTTTGCCGC GCCACAGAAA GTGGAACAAG CGCCATCTCC AACGGTGAAA
GTTGAAGCAC CACAACCTGG CTTCTTCAGC AAACTAGTGA GTGCGGTTAG CGCCATGTTT
GCGCCAAGCG AAAAAGCAGA GCCAGTAAAA GTTGTTGAAA CTAAAACAAC CGATACCAGT
GCTGCTAACG CCAACCGCCG TAACCGTCGC AACGATACTC GCCGCCCACG TAATGCCCAA
GATGCTGATA AAGCAAAAGA AGGCACTCGT GAACCACGCA GCCGTAATCC GAAAAAACCA
GCTGATGCCG CGGTAAGCAC AAGCACTCAA GAACGCCCTG TTCGCGAGAA GGAAGAAGCG
GTTAAGCGTC CAGCGAAAGC GGAACCTAAG CCACGTGTGC AAGCGCCAAA AGACGTGGTT
GCCGACGTTG AAGCCGATGC ACCTAAGCAA GAAGTCGCCC GTGAACGTCG TCAACGTCGT
AATATGCGCC GTAAGGTGCG TATCGATAAT GGCCATAACA CGCCAGATAA TGCGATCCCA
ATTGCACCAG AAGATGCTGC TGAAGTATTA GCTGAAATTG CAGCCATTAA CGCCGCAGCG
GCGAGCACTA TCAGTGTTGA CACTAAAGCT GAAGTTGCCC AAGCACCTGC TGAAACTAAA
GCGCCAAGAA CACGTCGTCA GCCTCGTAAA GAAGCGGCAC CTGCTCAAGA AGCTGCTGAA
AATGTTGCGG TAGAAGAGAA AGCGCTGAGT TCTGCGGCAG CTGAAAACCC AGTGGTTGAT
GCAGTTAAGA CTGAAGAACA GGCTGAAGTT GTTACAGCTG AAGTTGCAGC ACCAGCGGAT
GCGGTATCGC AAGATAACGA AGCGGTCGAT GCTGAAACTG AAAGTGAAAC TGCTGACGAT
CAAGCAAAAC GCGAGCAAAG AGATGGTCAA CGTCGTAGCC GTCGTAGCCC ACGTCACCTT
CGTGCAGCCG GTCAACGTCG TCGTCGTGAC GAAGATGACC AAGGTACATC AACGCCAGCG
CAATTCGTTC CAAATGACGA ATTAGGTGCT GACCAAGAGT ATCCAAGCGA AGTCGCCAGT
GTGCGTGTAG AAGCGCTAGT CGTCGCAACT AAAACAGATG CCATGACTGA AACTCAAGCA
ACGGCTAAAT CCGTTGAAGT AGAAACGGCA CAAGCAAGCG AAGCACCTGT TGTTGAAGCT
CCTGCAGCAG TTAAAGCTGA AGCAAAAGTT GAAACGCCAG CAAATGACGT TACAGCAGTC
GAAACTCAGC AAGTTGAAGC TAAGCCAGTT GAGACTAAAG CTACTGAAGC GAAAGCGCCA
AAAGCGGTTG AAGTGAAAGT TGACGTTGCG CCAGTCGTTG AGGCTCCCGT CGCTAACGTT
GCAGCTGAAG TCGAAGCGGT TAAAGCTCCT GTAGTTGAAA GCCCAGCGGT TACACCAGCT
GCGCCAAAAG TTGAAGCGGC TAAAGTTGAA GCGCCTAAGA CTGAAACTGC TGAAGAGCCA
AGCGTTGCAC CGAGTGTTGA AGTTAAAGAA GCGGTTAAAG CAACAGCCTC TGCCCCAATG
GCAAAACCTG CTGCTATCGC TAAACCTCAA ACAACAGTGC AAGCGGCCCC AACGACAGTG
AATTCGCAAA TCACCGATTC GGTTGATGCG GTTGTTGTCA ACAAGCCGAA AGCTGCCAGC
CGTTTTGGCT CTATGGTGTC TTCGGATATG ACCAAACCAG TTGTTGAAGT GAGAGAGCAA
GTGGCTGTAC CTAAAGGACG CGAGTATGAA AATACTGCGA CCGAAGAGCC TACCGCCAAA
ATCAAACTCG CTAACGGTGC AGAGTCGGAT ATGGCTCGTC CATAA
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| Protein sequence | MQRSAMFDDL YLKKNDVIMK RMLINATQSE ELRVALVDGQ QLYDLDIESP GHEQKKSNIY
KGKITRVEPS LEAAFVDYGA DRHGFLPLKE IAREYFPKGY SFQGRPNIKE VVSEGQEVIV
QIDKEERGNK GAALTTFISL AGSYLVLMPN NPRAGGISRR IEGDERTELK EAMADLEVPA
GMGLIVRTAG VGKESAELKW DLKVLQHHWA AITEASQVKG APFLIHQESN VIVRAIRDYL
RRDVGEILID HPRIFEEAKQ HIALVRPDFV ERVKLYEAEV PLFTHFQIES QIESAFQREV
RLPSGGSIVI DPTEALTSID INSARATKGG DIEETALNTN LEAADEIARQ LRLRDLGGLV
VIDFIDMTPV RHQREVENRL RDAVHHDRAR VQLGRISRFG LMEMSRQRLR PSLEESAAHI
CPRCHGQGTI RSTESLALSI LRLMEEEAIK ENTSQIEAIV PVDVAAFLLN EKRKAIRITE
QRHDVEVYVI PDAHMMTPDY RVIRHRSDDE ISESSYKRIE QPDAKLYEPR KLERTAAPIP
ALKGFAAPQK VEQAPSPTVK VEAPQPGFFS KLVSAVSAMF APSEKAEPVK VVETKTTDTS
AANANRRNRR NDTRRPRNAQ DADKAKEGTR EPRSRNPKKP ADAAVSTSTQ ERPVREKEEA
VKRPAKAEPK PRVQAPKDVV ADVEADAPKQ EVARERRQRR NMRRKVRIDN GHNTPDNAIP
IAPEDAAEVL AEIAAINAAA ASTISVDTKA EVAQAPAETK APRTRRQPRK EAAPAQEAAE
NVAVEEKALS SAAAENPVVD AVKTEEQAEV VTAEVAAPAD AVSQDNEAVD AETESETADD
QAKREQRDGQ RRSRRSPRHL RAAGQRRRRD EDDQGTSTPA QFVPNDELGA DQEYPSEVAS
VRVEALVVAT KTDAMTETQA TAKSVEVETA QASEAPVVEA PAAVKAEAKV ETPANDVTAV
ETQQVEAKPV ETKATEAKAP KAVEVKVDVA PVVEAPVANV AAEVEAVKAP VVESPAVTPA
APKVEAAKVE APKTETAEEP SVAPSVEVKE AVKATASAPM AKPAAIAKPQ TTVQAAPTTV
NSQITDSVDA VVVNKPKAAS RFGSMVSSDM TKPVVEVREQ VAVPKGREYE NTATEEPTAK
IKLANGAESD MARP
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