| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2548 |
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| Symbol | upp |
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| ID | 7086114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3033639 |
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| End bp | 3034265 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643461441 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_002358465 |
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| Protein GI | 217973714 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000189333 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000219395 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG TCGAGGTTAA ACATCCTTTA GTGCGTCACA AAATCGGTTT AATGCGCGAA
GGTGACATTA GCACTAAACG TTTCCGTGAG CTAGCCGCCG AAGTGGGCAG TTTATTAACC
TATGAAGCTA CCGCAGATTT CGAAACTGAA ACGGTGACGA TTGAAGGCTG GAACGGTCCG
GTTGAAGTCG ACCAAATCAA AGGTAAAAAA GTCACTGTTG TGCCGATTTT ACGTGCGGGT
TTGGGCATGA TGGACGGTGT GCTTGAGCAT ATCCCAAGTG CACGTATTTC AGTTGTCGGC
ATTTACCGTG ACGAAGAAAC CCTTGAGCCT GTGCCATATT TTGAAAAACT CGCCAGCGAC
ATGAACGAGC GTATCGCCTT AGTTGTCGAC CCAATGCTCG CGACTGGTGG TTCTATGATT
GCGACCGTCG ACTTATTGAA GAAACGCGGT TGTACTTCAA TCAAAGCCTT AGTGTTAGTG
GCTGCACCTG AAGGGATCAA AGCGTTAGAA GCGGCGCATC CTGATATCGA GTTATATACC
GCTGCTATCG ACAAGTGCCT CAATGAGAAG GGCTATATCC TGCCAGGTCT TGGTGATGCG
GGCGATAAAA TCTTTGGTAC TAAATAA
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| Protein sequence | MKVVEVKHPL VRHKIGLMRE GDISTKRFRE LAAEVGSLLT YEATADFETE TVTIEGWNGP
VEVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFEKLASD
MNERIALVVD PMLATGGSMI ATVDLLKKRG CTSIKALVLV AAPEGIKALE AAHPDIELYT
AAIDKCLNEK GYILPGLGDA GDKIFGTK
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